% MOOSE/REDBACK
% "We use the opensource REDBACK simulator ... based on ... MOOSE ..."
% https://www.academia.edu/download/111864380/ID178.pdf
@InProceedings{Poulet_2021b,
  author    = {Thomas Poulet and Ulrich Kelka and Vincent Crombez and Marcus Kunzmann and Teagan Blaikie and Heather Sheldon and Martin Lesueur},
  title     = {{Modelling fluid flow in complex 3D fault networks}},
  booktitle = {{Proceedings of the 3rd Australian Exploration Geoscience Conference (AEGC 2021)}},
  address   = {Brisbane, Australia},
  pages     = {xx (4 pages)},
  month     = sep # {~13--17,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/3ftf2w2r}}
}

% FEMuS/libMesh
% Manservisi_2024 states this article uses FEMuS.
% FEMuS incorporates various libMesh source files
% by copy/pasting them directly into its codebase.
% https://www.researchgate.net/publication/354226025_Simulation_of_TALL-3D_experimental_facility_with_a_multiscale_and_multiphysics_computational_platform
@InProceedings{Barbi_2021,
  author    = {G. Barbi and A. Cervone and A. Chierici and L. Chirco and R. {Da Vi{\`{a}}} and F. Franceschini and V. Giovacchini and S. Manservisi},
  title     = {{Simulation of TALL-3D experimental facility with a multiscale and multiphysics computational platform}},
  booktitle = {{Proceedings of the 9th International Conference on Computational Methods for Coupled Problems in Science and Engineering}},
  address   = {Chia Laguna, Sardinia, Italy},
  month     = jun # {~13--16,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/ycx7nrv2}}
}

% FEMuS/libMesh
% Manservisi_2024 states this article uses FEMuS.
% FEMuS incorporates various libMesh source files
% by copy/pasting them directly into its codebase.
@Article{Chirco_2021,
  author  = {Leonardo Chirco and Sandro Manservisi},
  title   = {An optimal control approach to a fluid-structure interaction parameter estimation problem with inequality constraints},
  journal = {Computers \& Fluids},
  month   = aug,
  year    = 2021,
  volume  = 226,
  pages   = {104999 (xx pages)},
  note    = {\url{https://doi.org/10.1016/j.compfluid.2021.104999}}
}

% MOOSE
% Achlys software is based on MOOSE
@Misc{Dixon_2021,
  author       = {Stephen Dixon},
  title        = {{aurora-multiphysics/achlys: Isotope self-diffusion}},
  month        = dec,
  year         = 2021,
  howpublished = {Software},
  note         = {Version 0.3.0, \url{https://doi.org/10.5281/zenodo.6412090}}
}

% MOOSE Mole/Yellowjacket
% https://www.osti.gov/biblio/1826681
@TechReport{Feng_2021b,
  author      = {Bo Feng and Shayan Shahbazi and Jun Fang and Ting Fei and Dillon Shaver},
  title       = {{Application of NEAMS codes to capture MSR phenomena}},
  institution = {Argonne National Laboratory},
  day         = 20,
  month       = aug,
  year        = 2021,
  number      = {ANL/NSE-21/48},
  note        = {\url{https://doi.org/10.2172/1826681}}
}

% MOOSE
% https://www.osti.gov/biblio/1821454
@TechReport{Shemon_2021b,
  author      = {E. Shemon and Y. S. Jung and S. Kumar and Y. Miao and K. Mo and A. Oaks and S. Richards},
  title       = {{MOOSE framework meshing enhancements to support reactor analysis}},
  institution = {Argonne National Laboratory},
  day         = 15,
  month       = sep,
  year        = 2021,
  number      = {ANL/NSE-21/43},
  note        = {\url{https://doi.org/10.2172/1821454}}
}

% MOOSE/Griffin
% "Griffin is a MOOSE-based reactor physics application for advanced reactor multiphysics modeling and simulation."
% https://www.osti.gov/biblio/1845956
@TechReport{Changho_2021,
  author      = {Changho Lee and Yeon Sang Jung and Hansol Park and Emily R. Shemon and Javier Ortensi and Yaqi Wang and Vincent M. Labour{\'{e}} and Zachary M. Prince},
  title       = {Griffin software development plan},
  institution = {Idaho and Argonne National Laboratories},
  day         = 1,
  month       = jun,
  year        = 2021,
  number      = {INL/EXT-21-63185},
  note        = {\url{https://doi.org/10.2172/1845956}}
}

% MOOSE/Pronghorn
% "Ultimately, a PBR bypass flow investigation is conducted using Pronghorn to explore the effects of bypass flow on PBR phenomena."
@mastersthesis{MacDonald_thesis,
  author = {Nolan MacDonald},
  school = {Texas A\&M University},
  title  = {Numerical modeling for characterization of pebble bed reactor bypass flows},
  note   = {\url{https://hdl.handle.net/1969.1/195439}},
  month  = aug,
  year   = 2021
}

% MOOSE
% "The dynamic equations above were solved by an open-source parallel finite element framework (MOOSE)"
% https://cpb.iphy.ac.cn/EN/article/downloadArticleFile.do?attachType=PDF&id=123830
@Article{Deng_2021,
  author  = {Ying-Yuan Deng and Can Guo and Jin-Cheng Wang and Qian Liu and Yu-Ping Zhao and Qing Yang},
  title   = {Phase-field study of spinodal decomposition under the effect of grain boundary},
  journal = {Chinese Physics B},
  month   = aug,
  volume  = 30,
  number  = 8,
  pages   = {088101 (5 pages)},
  year    = 2021,
  note    = {\url{https://doi.org/10.1088/1674-1056/abea9b}}
}

% MOOSE
% "We used phase-field module in MOOSE..."
% https://www.digitallibrarynasampe.org/data/webpages/s2021_webpages/110-TP21-0000000427.html
@InProceedings{Prater_2021,
  author    = {Tracie Prater and Dmitry Luchinsky and Vasyl Hafiychuk and Kevin Wheeler and Phillip Hall and Frank Ledbetter and Christopher Roberts and Alicia Carey and Patrick F. Flowers},
  title     = {{Adaptation of metal additive manufacturing processes for the International Space Station (ISS)}},
  booktitle = {{The Society for the Advancement of Material and Process Engineering (SAMPE) neXus}},
  address   = {Virtual, Online},
  month     = jun # {~29--} # jul # {~1,},
  year      = 2021,
  note      = {\url{https://doi.org/10.33599/nasampe/s.21.0427}}
}

% MOOSE
% "The simulator is an application developed based on the MOOSE framework..."
@phdthesis{JiaWang_thesis,
  author = {Jia Wang},
  school = {Karlsruhe Institute of Technology},
  title  = {Thermal modeling and inversion of borehole temperature data},
  note   = {\url{https://publikationen.bibliothek.kit.edu/1000150175}},
  month  = dec,
  year   = 2021
}

% MAST/libMesh
% Confirmed on ResearchGate that the authors use MAST/libMesh
@InProceedings{Arsalane_2021,
  author    = {Walid Arsalane and Manav Bhatia},
  title     = {Structural sizing of thermally stressed hat-stiffened panels},
  booktitle = {{Proceedings of the AIAA Aviation 2021 Forum}},
  address   = {Virtual Event},
  pages     = {AIAA 2021-3092 (xx pages)},
  month     = aug # {~2--6,},
  year      = 2021,
  note      = {Session: Design Optimization of Complex Engineered Systems, \url{https://doi.org/10.2514/6.2021-3092}}
}

% MOOSE
% "SWIFT utilizes a number of MOOSE capabilities in order to capture the thermochemistry of metal hydrides at high temperature."
% https://www.osti.gov/biblio/1829624-metal-hydride-simulations-using-swift
@TechReport{Matthews_2021b,
  author      = {Christopher Matthews and Aditya Prahlad Shivprasad and Michael William Donald Cooper},
  title       = {{Metal hydride simulations using SWIFT}},
  institution = {Los Alamos National Laboratory},
  day         = 8,
  month       = nov,
  year        = 2021,
  number      = {LA-UR-21-27538},
  note        = {\url{https://doi.org/10.2172/1829624}}
}

% MOOSE
% Confirmed that the authors used MOOSE on Research Gate
@Article{Javanmard_2021,
  author  = {Hoda Javanmard and Anozie Ebigbo and Stuart D. C. Walsh and Martin O. Saar and Daniel Vogler},
  title   = {{No-Flow Fraction (NFF) permeability model for rough fractures under normal stress}},
  journal = {Water Resources Research},
  month   = mar,
  year    = 2021,
  volume  = 57,
  number  = 3,
  pages   = {e2020WR029080 (xx pages)},
  note    = {\url{https://doi.org/10.1029/2020WR029080}}
}

% libMesh
% "Calculations are performed by code based on the libMesh library ..."
% The authors provided a full-text copy on Research Gate.
@InProceedings{Akhukov_2021,
  author    = {Mikhail Akhukov and Daria Guseva and Andrey Kniznik and Pavel Komarov and Vladimir Rudyak and Denis Shirabaykin and Anton Skomorokhov and Sergey Trepalin and Boris Potapkin},
  title     = {{Multicomp: Software package for multiscale simulations}},
  booktitle = {{7th Russian Supercomputing Days (RuSCDays 2021)}},
  address   = {Moscow, Russia},
  editor    = {Vladimir Voevodin and Sergey Sobolev},
  pages     = {174--185},
  month     = sep # {~27--28,},
  year      = 2021,
  note      = {\url{https://doi.org/10.1007/978-3-030-92864-3_14}}
}

% MOOSE
% Authors confirmed that they used MOOSE in ResearchGate comment.
@Article{Khaledi_2021,
  author  = {Kavan Khaledi and Pooya Hamdi and Lisa Winhausen and Mohammadreza Jalali and David Jaeggi and Florian Amann},
  title   = {Unloading induced absolute negative pore pressures in a low permeable clay shale},
  journal = {Engineering Geology},
  month   = dec,
  year    = 2021,
  volume  = 295,
  pages   = {106451 (xx pages)},
  note    = {\url{https://doi.org/10.1016/j.enggeo.2021.106451}}
}

% MOOSE/SAM
% "This work contributes ... a model of the EBR-II core that can measure reactivity feedbacks using the System Analysis Module, SAM"
@mastersthesis{Chakinis_thesis,
  author = {Michael Chakinis},
  school = {University of Illinois at Urbana-Champaign},
  title  = {{Reactivity feedback analysis for EBR-II benchmark}},
  note   = {\url{http://hdl.handle.net/2142/113935}},
  month  = dec,
  year   = 2021
}

% MOOSE
% The governing equations, ... are solved using ... (MOOSE) ..."
% https://repository.mines.edu/bitstream/handle/11124/176507/Toghraee_mines_0052E_12188.pdf?sequence=1&isAllowed=y
@phdthesis{Toghraee_thesis,
  author = {Alireza Toghraee},
  school = {Colorado School of Mines},
  title  = {Phase-field study of diffusion controlled phenomena: Reorientation of zirconium hydrides and oxidation of metals},
  note   = {\url{https://hdl.handle.net/11124/176507}},
  month  = dec,
  year   = 2021
}

% MOOSE
% https://www.osti.gov/biblio/1847108
@TechReport{Giudicelli_2021c,
  author      = {Guillaume Giudicelli and Alexander Lindsay and Ramiro Freile and Jieun Lee},
  title       = {{NEAMS TH CRAB}},
  institution = {USDOE Office of Nuclear Energy (NE)},
  day         = 1,
  month       = sep,
  year        = 2021,
  number      = {INL/EXT-21-64625},
  note        = {\url{https://doi.org/10.1016/j.jmps.2022.104822}}
}

% MOOSE/phase_field
% "Eqs. (8) and (9) were solved using the finite element method (FEM) in ... (MOOSE) Framework"
@Article{Zuo_2021,
  author  = {X. Zuo and A. Miotti Bettanini and A. Hilhorst and P. J. Jacques and N. Moelans},
  title   = {{Influence of 5 at.\%Al-additions on the FCC to BCC phase transformation in CrFeNi concentrated alloys}},
  journal = {Journal of Phase Equilibria and Diffusion},
  month   = oct,
  year    = 2021,
  volume  = 42,
  number  = 5,
  pages   = {794--813},
  note    = {\url{https://doi.org/10.1007/s11669-021-00924-7}}
}

% MOOSE
% "The integrals in Equations ... are implemented and solved numerically in the finite element software MOOSE"
% https://hammer.purdue.edu/articles/thesis/Computational_modeling_of_energetic_materials_under_impact_and_shock_compression/16766503
@phdthesis{Cordon_thesis,
  author = {Camilo Alberto Duarte Cordon},
  school = {Purdue University},
  title  = {Computational modeling of energetic materials under impact and shock compression},
  note   = {\url{https://doi.org/10.25394/PGS.16766503.v1}},
  month  = dec,
  year   = 2021
}

% MOOSE/libmesh is discussed in a Section on MOOSE
@TechReport{Finkel_2021,
  author      = {Hal Finkel and Ben Brown and Robinson Pino and Saswata Hier-Majumder and Bill Spotz},
  title       = {Responses to the request for information on stewardship of software for scientific and high-performance computing},
  institution = {USDOE Office of Science},
  day         = 1,
  month       = dec,
  year        = 2021,
  number      = {DOE-HQ-2021-0027-0001},
  note        = {\url{https://doi.org/10.2172/1843576}}
}

% MOOSE/MARMOT
@TechReport{Tucker_2021,
  author      = {Julie Tucker and Bukan Isgor and Liney Arnadottir and Melissa Santala and Yongfeng Zhang and Larry Aagesen},
  title       = {{Combined modeling and experiments to predict corrosion and embrittlement in dual-phase stainless steels within the MARMOT framework}},
  institution = {USDOE Office of Nuclear Energy (NE), Nuclear Energy Advanced Modeling and Simulation (NEAMS)},
  day         = 28,
  month       = dec,
  year        = 2021,
  number      = {17-12748},
  note        = {\url{https://doi.org/10.2172/1839441}}
}

% libMesh
% This thesis uses the libmesh git repo as a data source
@phdthesis{Tu_thesis,
  author = {Huy Quang Tu},
  school = {North Carolina State University},
  title  = {Reducing effort of labelling software engineering data with semi-supervised learning},
  note   = {\url{https://repository.lib.ncsu.edu/handle/1840.20/39393}},
  month  = dec,
  year   = 2021
}

% MOOSE
% "We therefore purs[u]e ... using the Picard iterations of the nonlinear solver in MOOSE."
% https://www.proquest.com/openview/6490d22d33c8a12ae5d8844c3fa02ad4/
@phdthesis{Miller_thesis,
  author = {N. A. Miller},
  school = {University of Colorado},
  title  = {A micromorphic length-scale coupling framework for the determination of higher-order constitutive models and the multi-scale simulation of heterogeneous materials},
  note   = {\url{https://tinyurl.com/yckb8f25}},
  month  = dec,
  year   = 2021
}

% MOOSE
% "Based on the multi-physics coupling platform MOOSE ... the modular system safety analysis code, ZEBRA, was developed."
@Article{Yuhang_2021,
  author  = {Niu Yuhang and He Yanan and Wu Yingwei and Xiang Fengrui and Deng Chaoqun and Yu Yang and Su Guanghui and Qiu Suizheng and Tian Wenxi and Lu Tianyu},
  title   = {{Analysis of primary loop system of high-order fully-implicit nuclear reactor based on MOOSE platform}},
  journal = {Nuclear Power Engineering},
  month   = dec,
  year    = 2021,
  volume  = 42,
  number  = 6,
  pages   = {50--57},
  note    = {\url{https://doi.org/10.13832/j.jnpe.2021.06.0050}}
}

% MOOSE
% "The calculations are performed using the Ferret package ... in the MOOSE framework..."
@Article{Co_2021,
  author  = {Kevin Co and S. Pamir Alpay and Serge Nakhmanson and John Mangeri},
  title   = {Surface charge mediated polar response in ferroelectric nanoparticles},
  journal = {Applied Physics Letters},
  month   = dec,
  year    = 2021,
  volume  = 119,
  number  = 26,
  pages   = {262903 (5 pages)},
  note    = {\url{https://doi.org/10.1063/5.0077629}}
}

% MOOSE
% "We developed a continuum model to describe the coupled physics of reduced-order chemistry and thermal transport and implemented them in the MOOSE simulation framework"
% https://hammer.purdue.edu/articles/thesis/UNDERSTANDING_THE_DECOMPOSITION_PROCESSES_OF_HIGH-ENERGY_DENSITY_MATERIALS/15039924
@phdthesis{Sakano_thesis,
  author = {Michael N. Sakano},
  school = {Purdue University},
  title  = {Understanding the decomposition processes of high-energy density materials},
  note   = {\url{https://doi.org/10.25394/PGS.15039924.v1}},
  month  = aug,
  year   = 2021
}

% MOOSE/MARMOT
% "A comprehensive grain growth data of UO2 was collected for further analysis and for the implementation to the MARMOT tool"
@TechReport{Chen_2021,
  author      = {Wei-Ying Chen and Meimei Li and Richard Sisson and Peter Baldo and Zefeng Yu and Chris Ulmer and Arthur T. Motta},
  title       = {{IVEM Contributions to CINR Penn State MT17-12797: In situ ion irradiation to add irradiation assisted grain growth to the MARMOT tool}},
  institution = {Argonne National Laboratory},
  day         = 1,
  month       = sep,
  year        = 2021,
  number      = {ANL/NSE-21/57},
  note        = {\url{https://doi.org/10.2172/1822201}}
}

% MOOSE
% "Aging simulations are performed with the DG-OSPREY model which is ... built within the ... (MOOSE) modeling framework"
% https://www.osti.gov/biblio/1778083-mechanistic-understanding-silver-sorbent-aging-processes-off-gas-treatment
@TechReport{Seungrag_2021,
  author      = {Seungrag Choi and Yue Nan and Lawrence L. Tavlarides and Alexander I. Wiechert and Ziheng Shen and Sotira Yiacoumi and Austin P. Ladshaw and Costas Tsouris},
  title       = {{Mechanistic understanding of silver sorbent aging processes in off-gas treatment}},
  institution = {Oak Ridge National Laboratory},
  day         = 1,
  month       = apr,
  year        = 2021,
  number      = {ORNL/SPR-2021/1779},
  note        = {\url{https://doi.org/10.2172/1778083}}
}

% MOOSE
% https://www.osti.gov/biblio/1828881-fy21-progress-report-bison-metallic-fuel-model-development-using-ebr-ii-legacy-data
@TechReport{Miao_2021b,
  author      = {Yinbin Miao and Aaron Oaks and Abdellatif M. Yacout and Christopher Matthews and Stephen Novascone},
  title       = {{FY21 progress report on BISON metallic fuel model development and V\&V using EBR-II legacy data}},
  institution = {Argonne National Laboratory},
  day         = 30,
  month       = sep,
  year        = 2021,
  number      = {ANL/CFCT-21/19},
  note        = {\url{https://doi.org/10.2172/1828881}}
}

% MOOSE
% "The constitutive model has been implemented as a user-defined material model and interfaced with the open source finite element code, MOOSE..."
% https://www.researchgate.net/publication/355774101_A_Machine_Learning-based_surrogate_modeling_framework_for_predicting_the_history-dependent_deformation_of_dual_phase_microstructures
@Article{Khandelwal_2021,
  author  = {Sarthak Khandelwal and Soudip Basu and Anirban Patra},
  title   = {{A Machine Learning-based surrogate modeling framework for predicting the history-dependent deformation of dual phase microstructures}},
  journal = {Materials Today Communications},
  month   = dec,
  year    = 2021,
  volume  = 29,
  pages   = {102914 (xx pages)},
  note    = {\url{https://doi.org/10.1016/j.mtcomm.2021.102914}}
}

% MOOSE
% This paper is in Chinese, but I'm fairly sure there's a sentence that says MOOSE is used to solve Eqs. (2)-(7)
% English version: https://lxxb.cstam.org.cn/en/article/doi/10.6052/0459-1879-21-389
@Article{Min_2021,
  author  = {Min Yi and Ke Chang and Chenguang Liang and Liucheng Zhou and Yangyiwei Yang and Xin Yi and Baixiang Xu},
  title   = {Computational study of evolution and fatigue dispersity of microstructures by additive manufacturing},
  journal = {Chinese Journal of Theoretical and Applied Mechanics},
  month   = sep,
  year    = 2021,
  volume  = 53,
  number  = 12,
  pages   = {3265--3275},
  note    = {\url{https://doi.org/10.6052/0459-1879-21-389}}
}

% MOOSE
% "The equations are then nondimensionalized and solved using ... (MOOSE)"
% https://hdl.handle.net/11681/42605
@TechReport{Allen_2021,
  author      = {Jeffrey B. Allen and Robert D. Moser and Zackery B. McClelland and Md Mohaiminul Islam and Ling Liu},
  title       = {Phase-field modeling of nonequilibrium solidification processes in additive manufacturing},
  institution = {Engineer Research and Development Center, US Army Corps of Engineers},
  month       = nov,
  year        = 2021,
  number      = {ERDC TR-21-21},
  note        = {\url{https://doi.org/10.21079/11681/42605}}
}

% MOOSE
% "the numerical model was implemented within ... (MOOSE)"
@Article{RogerHu_2021,
  author  = {Roger Hu and Stuart D. C. Walsh},
  title   = {Effective continuum approximations for permeability in brown-coal and other large-scale fractured media},
  journal = {Geosciences},
  month   = dec,
  year    = 2021,
  volume  = 11,
  number  = 12,
  pages   = {511 (16 pages)},
  note    = {\url{https://doi.org/10.3390/geosciences11120511}}
}

% MOOSE
% "MOOSE calculates the corresponding change in temperature and density on the same mesh"
% https://hpcfusion.bsc.es/wordpress/wp-content/uploads/2021/10/Helen-Brooks_abstract_HPCFusion2021.pdf
@InProceedings{Brooks_2021,
  author    = {H. Brooks and A. Davis},
  title     = {{Scalable multi-physics for fusion reactors with AURORA}},
  booktitle = {{Invited Talk, 2nd Fusion HPC Workshop}},
  address   = {Virtual, Online},
  month     = dec # {~2--3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/2p8ztdjw}}
}

% libMesh
% "All implementations in this work uses the libMesh library."
% https://www.researchgate.net/publication/357050695_Simulation_of_gas_bubble_dynamics_using_a_phase-field_model
@InProceedings{Grave_2021c,
  author    = {Mal{\'{u}} Grave and Alvaro L. G. A. Coutinho},
  title     = {Simulation of gas bubble dynamics using a phase-field model},
  booktitle = {{Proceedings of the XLII Ibero-Latin-American Congress on Computational Methods in Engineering and III Pan-American Congress on Computational Mechanics (CILAMCE 2021-PANACM 2021)}},
  address   = {Rio de Janeiro, Brazil},
  month     = nov # {~9--12,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/4urjp6ma}}
}

% MOOSE
% "Both forms of equations are implemented in the open source GOLEM/MOOSE simulation environment"
@Article{QDeng_2021,
  author  = {Qinglin Deng and Guido Bl{\"{o}}cher and Mauro Cacace and Jean Schmittbuhl},
  title   = {Hydraulic diffusivity of a partially open rough fracture},
  journal = {Rock Mechanics and Rock Engineering},
  month   = oct,
  year    = 2021,
  volume  = 54,
  number  = 10,
  pages   = {5493--5515},
  note    = {\url{https://doi.org/10.1007/s00603-021-02629-2}}
}

% BISON
@TechReport{Greenquist_2021b,
  author      = {Ian Greenquist and Jeffrey Powers},
  title       = {{Sensitivity and uncertainty of the IFR-1 BISON benchmark}},
  institution = {Oak Ridge National Laboratory},
  day         = 1,
  month       = nov,
  year        = 2021,
  number      = {ORNL/TM-2021/2230},
  note        = {\url{https://doi.org/10.2172/1831619}}
}

% MOOSE
% "All codes were developed within the MOOSE ... framework."
@TechReport{Stauff_2021,
  author      = {N. Stauff and K. Mo and Y. Cao and J. Thomas and Y. Miao and L. Zou and D. Nunez and E. Shemon and B. Feng and K. Ni},
  title       = {{Detailed analyses of a TRISO-fueled microreactor}},
  institution = {Argonne National Laboratory},
  day         = 30,
  month       = sep,
  year        = 2021,
  number      = {ANL/NEAMS-21/3},
  note        = {\url{https://doi.org/10.2172/1826285}}
}

% MOOSE/phase_field
% https://www.proquest.com/openview/64188668f043260001bb8946830b30b8/1
@phdthesis{Simon_thesis,
  author = {Pierre-Cl{\'{e}}ment A. Simon},
  school = {The Pennsylvania State University},
  title  = {Phase field modeling and quantification of zirconium hydride morphology},
  note   = {\url{https://tinyurl.com/4vky4vpw}},
  month  = may,
  year   = 2021
}

% BISON
% "The implemented models were demonstrated to improve BISON's capabilities of predicting cladding damage and degradation behavior"
% Requested full-text on ResearchGate
@Article{Miao_2021,
  author  = {Yinbin Miao and Aaron Oaks and Kun Mo and Michael Billone and Christopher Matthews and Adam X. Zabriskie and Stephen Novascone and Abdellatif M. Yacout},
  title   = {{Metallic fuel cladding degradation model development and evaluation for BISON}},
  journal = {Nuclear Engineering and Design},
  month   = dec,
  year    = 2021,
  volume  = 385,
  pages   = {111531 (xx pages)},
  note    = {\url{https://doi.org/10.1016/j.nucengdes.2021.111531}}
}

% MOOSE
% https://www.ans.org/meetings/wm2021/session/view-798/#paper_2179
% The abstract does not specifically mention MOOSE, but these are all INL people
@InProceedings{Higgins_2021,
  author    = {Noah Higgins and Sebastian Schunert and Stefano Terlizzi and Ching-Sheng Lin and Vincent Labour{\'{e}} and Mark DeHart},
  title     = {Modelling nuclear thermal propulsion reactor startup transients},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/yv29z27f}}
}

% MOOSE
% https://www.ans.org/meetings/wm2021/session/view-865/#paper_1964
@InProceedings{Feng_2021,
  author    = {Bo Feng and Jun Fang and Thanh Q. Hua and Nicolas E. Stauff and April J. Novak and Ling Zou and Rui Hu and Paolo Balestra and David Reger and Nicolas P. Martin and Guillaume Giudicelli and Abdalla Abou-Jaoude},
  title     = {{Single- and multi-physics models of advanced reactors in the Virtual Test Bed}},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/yckrpzvx}}
}

% MOOSE
% https://www.ans.org/meetings/wm2021/session/view-874/#paper_1964
@InProceedings{AbouJaoude_2021c,
  author    = {Abdalla Abou-Jaoude and Derek R. Gaston and Guillaume Giudicelli and Bo Feng and Cody J. Permann},
  title     = {{Overview of the Virtual Test Bed (VTB)}},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/27vshm8a}}
}

% MOOSE
% https://www.ans.org/meetings/wm2021/session/view-874/#paper_1965
@InProceedings{AbouJaoude_2021d,
  author    = {Abdalla Abou-Jaoude and Ramiro Freile and Guillaume Giudicelli and Sterling M. Harper},
  title     = {{Coupled Griffin and Pronghorn simulation of the molten salt fast reactor (MSFR) for the Virtual Test Bed}},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/yck3mue7}}
}

% MOOSE
% https://www.researchgate.net/publication/356728287_Conjugate_Heat_Transfer_Coupling_of_NekRS_and_MOOSE_for_Bypass_Flow_Modeling
% https://www.ans.org/meetings/wm2021/session/view-874/#paper_1966
@InProceedings{Novak_2021c,
  author    = {April Novak and Dillon Shaver and Bo Feng},
  title     = {{Conjugate heat transfer coupling of NekRS and MOOSE for bypass flow modeling}},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/3etbe6dx}}
}

% MOOSE
% https://www.ans.org/meetings/wm2021/session/view-874/#paper_1967
@InProceedings{Giudicelli_2021b,
  author    = {Guillaume Giudicelli and Abdalla Abou-Jaoude and April J. Novak},
  title     = {{Coupled multiphysics simulation of the Mk1-FHR in the Virtual Test Bed}},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/yc2rx999}}
}

% MOOSE/Griffin
% https://www.researchgate.net/publication/356683287_Improved_Point_Kinetic_Parameters_Generation_for_Pebble_Bed_Reactor_Transient_Simulation_using_NEAMS_Tools
% https://www.ans.org/meetings/wm2021/session/view-803/#paper_2288
@InProceedings{Reger_2021,
  author    = {David Reger and Paolo Balestra and Ryan Stewart and Elia Merzari},
  title     = {{Improved Point Kinetic Parameters Generation for Pebble Bed Reactor Transient Simulation using NEAMS Tools}},
  booktitle = {Transactions of the American Nuclear Society Winter Meeting},
  address   = {Washington, DC},
  month     = nov # {~30--} # dec # {~3,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/2p8wsjys}}
}

% MOOSE
@Article{Wilkins_2021b,
  author  = {Andy Wilkins and Christopher P. Green and Logan Harbour and Robert Podgorney},
  title   = {{The MOOSE geochemistry module}},
  journal = {The Journal of Open Source Software},
  month   = dec,
  year    = 2021,
  volume  = 6,
  number  = 68,
  pages   = {3314 (12 pages)},
  note    = {\url{https://doi.org/10.21105/joss.03314}}
}

% MOOSE
% "The software, which is based on the finite element solver MOOSE ... is freely available"
@Article{Degen_2021,
  author  = {Denise Degen and Cameron Spooner and Magdalena Scheck-Wenderoth and Mauro Cacace},
  title   = {{How biased are our models? -- A case study of the alpine region}},
  journal = {Geoscientific Model Development},
  month   = nov,
  year    = 2021,
  volume  = 14,
  number  = 11,
  pages   = {7133--7153},
  note    = {\url{https://doi.org/10.5194/gmd-14-7133-2021}}
}

% MOOSE
% "The model has been implemented in MOOSE finite element C++ library..."
@Article{Laghmach_2021b,
  author  = {Rabia Laghmach and Michele {Di Pierro} and Davit A. Potoyan},
  title   = {The interplay of chromatin phase separation and lamina interactions in nuclear organization},
  journal = {Biophysical Journal},
  month   = nov,
  year    = 2021,
  volume  = 120,
  number  = 22,
  pages   = {5005--5017},
  note    = {\url{https://doi.org/10.1016/j.bpj.2021.10.012}, bioR$\chi$iv e-print: \url{https://doi.org/10.1101/2021.03.16.435657}}
}

% MOOSE
% "The models are ... (FEM) within the simulator "NIsoS" developed by authors based on MOOSE framework"
@Article{XZhou_2021b,
  author  = {Xiandong Zhou and Yangyiwei Yang and Somnath Bharech and Binbin Lin and J{\"{o}}rg Schr{\"{o}}der and Bai-Xiang Xu},
  title   = {{3D-multilayer simulation of microstructure and mechanical properties of porous materials by selective sintering}},
  journal = {GAMM-Mitteilungen},
  month   = nov,
  year    = 2021,
  volume  = 44,
  number  = 4,
  pages   = {e202100017 (17 pages)},
  note    = {\url{https://doi.org/10.1002/gamm.202100017}, Special Issue: Mechanics of Additive Manufacturing -- Part II}
}

% MOOSE
@Article{AbouJaoude_2021,
  author  = {Abdalla Abou-Jaoude and Samuel A. Walker and Sandesh Bhaskar and Wei Ji},
  title   = {Feasibility assessment of a natural-circulation salt irradiation loop in the Advanced Test Reactor},
  journal = {Nuclear Technology},
  month   = dec,
  year    = 2021,
  volume  = 207,
  number  = 12,
  pages   = {1821--1841},
  note    = {\url{https://doi.org/10.1080/00295450.2020.1843954}}
}

% MOOSE/BISON
% "Finally, for some steps, BISON ... will also be used as high fidelity code and its results will be compared with FRAPCON"
% https://www.researchgate.net/publication/355942272_HIGH_TO_LOW_METHODOLOGY_FOR_GAP_HEAT_TRANSFER_IN_AN_UNCERTAINTY_QUANTIFICATION_FRAMEWORK_FOR_DEPLETION
% The ResearchGate link gives this DOI but it does not seem to be live: https://doi.org/10.13182/M&C21-33886
% https://www.ans.org/meetings/mc2021/session/view-701/#paper_1688
@InProceedings{Fustero_2021,
  author    = {J. Fustero and G. K. Delipei and A. Abarca and A. Bennett and M. Avramova and K. Ivanov},
  title     = {{High to low methodology for gap heat transfer in an uncertainty quantification framework for depletion}},
  booktitle = {{Proceedings of the International Conference on Mathematics and Computational Methods Applied to Nuclear Science \& Engineering (M\&C 2021)}},
  address   = {Raleigh, North Carolina},
  month     = oct # {~3--7,},
  year      = 2021,
  pages     = {1676--1687},
  note      = {\url{https://tinyurl.com/5j684jh9}}
}

% MOOSE
% "MOOSE ... was used to obtain the numerical solutions presented in chapter 6"
@phdthesis{Salgado_thesis,
  author = {Rui Martim Lopes Busto Salgado},
  school = {University of Porto},
  title  = {Multi-field modelling of composite batteries},
  note   = {\url{https://hdl.handle.net/10216/137339}},
  month  = sep,
  year   = 2021
}

% MOOSE/MARMOT
% "We then employ simple two-dimensional (2D) mesoscale simulations to provide insights into crack formation and free uranium transport..."
@Article{Hirschhorn_2021b,
  author  = {Jacob Hirschhorn and Floyd Hilty and Michael R. Tonks and Jhonathan Rosales},
  title   = {{Review and preliminary investigation into fuel loss from cermets composed of uranium nitride and a molybdenum-tungsten alloy for nuclear thermal propulsion using mesoscale simulations}},
  journal = {Journal of the Minerals, Metals, and Materials Society (JOM)},
  month   = nov,
  year    = 2021,
  volume  = 73,
  number  = 11,
  pages   = {3528--3543},
  note    = {\url{https://doi.org/10.1007/s11837-021-04873-x}}
}

% MOOSE/BISON
@Article{Gamble_2021b,
  author  = {K. A. Gamble and T. W. Knight and E. Roberts and J. D. Hales and B. W. Spencer},
  title   = {{Mechanistic verification of empirical UO$_2$ fuel fracture models}},
  journal = {Journal of Nuclear Materials},
  month   = dec,
  year    = 2021,
  volume  = 556,
  pages   = {153163 (15 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153163}}
}

% MOOSE
@InProceedings{Weiss_2021,
  author    = {Abdullah G. Weiss and M. Gomaa Abdoelatef and Mohammad T. H. Bani Ahmad and Karim Ahmed and Mark L. Kimber},
  title     = {{A preliminary evaluation of the computational fluid dynamics capabilities in MOOSE}},
  booktitle = {{Proceedings of the 28th International Conference on Nuclear Engineering (ICONE28)}},
  address   = {Virtual},
  month     = aug # {~4--6,},
  year      = 2021,
  pages     = {V003T08A016 (9 pages)},
  note      = {Paper no. ICONE28-64908, {\url{https://doi.org/10.1115/ICONE28-64908}}}
}

% MOOSE
% https://www.ans.org/meetings/mc2021/session/view-705/#paper_1704
@InProceedings{Giudicelli_2021,
  author    = {Guillaume Giudicelli and Alexander Lindsay and Paolo Balestra and Robert Carlsen and Javier Ortensi and Derek Gaston and Mark DeHart and Abdalla Abou-Jaoude and April J. Novak},
  title     = {{Coupled multiphysics multiscale transient simulations of the Mk1-FHR reactor using finite volume capabilities of the MOOSE framework}},
  booktitle = {{Proceedings of the International Conference on Mathematics and Computational Methods Applied to Nuclear Science \& Engineering (M\&C 2021)}},
  address   = {Raleigh, North Carolina},
  month     = oct # {~3--7,},
  year      = 2021,
  pages     = {2251--2262},
  note      = {\url{https://tinyurl.com/2rdrpvhm}}
}

% MOOSE/SAM
% "We constructed our ... model ... using ... MOOSE/SAM"
@Article{JWang_2021,
  author  = {Jun Wang and Justin A. Apresa and Matthew Weathered and Alejandro Perez and Michael Corradini},
  title   = {{Transient safety evaluation of the heat pipe microreactor --- Potential energy source for hydrogen production}},
  journal = {International Journal of Hydrogen Energy},
  month   = nov,
  year    = 2021,
  volume  = 46,
  number  = 78,
  pages   = {38887--38902},
  note    = {\url{https://doi.org/10.1016/j.ijhydene.2021.09.113}}
}

% MOOSE/BISON
@Article{Collin_2021,
  author  = {B. Collin and W. Jiang and K. Gamble and R. Gardner and J. Hales and B. Haugh and S. Novascone and J. Roche and B. Spencer and A. Toptan},
  title   = {{TRISO fuel performance modelling with BISON}},
  journal = {Journal of Physics: Conference Series},
  month   = oct,
  year    = 2021,
  volume  = {2048},
  pages   = {012012 (15 pages)},
  note    = {\url{https://doi.org/10.1088/1742-6596/2048/1/012012}, International Conference on High-Temperature Reactor Technology (HTR 2021), 2--5 June 2021, Virtual Conference -- Yogyakarta, Indonesia}
}

% MOOSE/Griffin
@Article{Ortensi_2021,
  author  = {Javier Ortensi and Benjamin A. Baker and Matthew P. Johnson and Yaqi Wang and Vincent M. Labour{\'{e}} and Sebastian Schunert and Frederick N. Gleicher and Mark D. DeHart},
  title   = {{Validation of the Griffin application for TREAT transient modeling and simulation}},
  journal = {Nuclear Engineering and Design},
  month   = dec,
  year    = 2021,
  volume  = 385,
  pages   = {111478 (13 pages)},
  note    = {\url{https://doi.org/10.1016/j.nucengdes.2021.111478}}
}

% MOOSE
% Note: the second author's first and last names are apparently only one letter
@Article{Wandke_2021,
  author  = {Kevin Wandke and {Y Z}},
  title   = {{MOOSE-based finite element hyperelastic modeling for soft robot simulations}},
  journal = {IEEE Access},
  month   = oct,
  year    = 2021,
  volume  = 9,
  pages   = {139627--139635},
  note    = {\url{https://doi.org/10.1109/ACCESS.2021.3119009}}
}

% MOOSE/BISON
% https://inldigitallibrary.inl.gov/sites/sti/sti/Sort_53305.pdf
% https://www.osti.gov/biblio/1825268-matrix-graphite-material-models-pebbles-compacts-bison
@TechReport{Toptan_2021b,
  author      = {Aysenur Toptan and Wen Jiang and Stephen R. Novascone and Jason D. Hales},
  title       = {{Matrix graphite material models in pebbles and compacts for Bison}},
  institution = {Idaho National Laboratory},
  day         = 30,
  month       = sep,
  year        = 2021,
  number      = {INL/EXT-21-64643},
  note        = {\url{https://tinyurl.com/3rymbbjb}}
}

% MOOSE/BISON
% https://www.osti.gov/biblio/1825512-efficient-failure-probability-calculations-modeling-interface-debonding-triso-particles-bison
% https://inldigitallibrary.inl.gov/sites/sti/sti/Sort_53251.pdf
@TechReport{Jiang_2021b,
  author      = {Wen Jiang and Gyanender Singh and Jason D. Hales and Aysenur Toptan and Benjamin W. Spencer and Stephen R. Novascone},
  title       = {{Efficient failure probability calculations and modeling interface debonding in TRISO particles with BISON}},
  institution = {Idaho National Laboratory},
  day         = 30,
  month       = sep,
  year        = 2021,
  number      = {INL/EXT-21-64589},
  note        = {\url{https://tinyurl.com/4pv976yn}}
}

% LibMesh
% "It relies on state-of-the-art libraries: libMesh ... and ... a suite of scalable parallel nonlinear and linear solvers"
@Article{Jacquey_2021b,
  author  = {Antoine B. Jacquey and Klaus Regenauer-Lieb and Mauro Cacace},
  title   = {{Thermomechanics for geological, civil engineering and geodynamic applications: Numerical implementation and application to the Bentheim Sandstone}},
  journal = {Rock Mechanics and Rock Engineering},
  month   = oct,
  year    = 2021,
  volume  = 54,
  number  = 10,
  pages   = {5337--5354},
  note    = {\url{https://doi.org/10.1007/s00603-021-02582-0}}
}

% MOOSE
% "In addition, the wettability problem was resolved ... using a ... (FEM)-based discretization ... in MOOSE ..."
@Article{Hussain_2021,
  author  = {Muhammad Muzammal Hussain and Anil Kunwar and Muhammad K. Majeed and Yunpeng Wang and Adil Saleem and Haitao Ma},
  title   = {{Superhydrophobic surface and lubricant-infused surface: Implementing two extremes on electrodeposited Ni--TiO$_2$ surface to drive optimal wettability regimes for droplets' multifunctional behaviors}},
  journal = {Advanced Engineering Materials},
  month   = oct,
  year    = 2021,
  volume  = 23,
  number  = 10,
  pages   = {2100266 (14 pages)},
  note    = {\url{https://doi.org/10.1002/adem.202100266}}
}

% MOOSE
% "... simulation of ... (HTTR) Loss Of ForcedCooling (LOFC) experiment[s] with ... Griffin, BISON and RELAP-7 ..."
% https://inldigitallibrary.inl.gov/sites/sti/sti/Sort_50860.pdf
@TechReport{Laboure_2021,
  author      = {Vincent Labour{\'{e}} and Javier Ortensi and Paolo Balestra and Andrew Hermosillo and Gerhard Strydom},
  title       = {{FY21 status report on the CMVB and CNWG international collaborations}},
  institution = {Idaho National Laboratory},
  day         = 1,
  month       = sep,
  year        = 2021,
  number      = {INL/EXT-21-64241},
  note        = {\url{https://www.osti.gov/biblio/1822883}}
}

% MOOSE/RELAP-7
% https://inldigitallibrary.inl.gov/sites/sti/sti/Sort_49748.pdf
@Misc{Cavaluzzi_2021b,
  author       = {Jack M. Cavaluzzi and David Andr{\v{s}}},
  title        = {{Reactor core isolation cooling system model development and implementation in RELAP-7}},
  month        = aug,
  year         = 2021,
  howpublished = {Poster},
  note         = {INL/MIS-21-64036, \url{https://tinyurl.com/kmt4hbnt}}
}

% libMesh
% "All simulations have been performed using the libMesh ..."
% https://www.researchgate.net/publication/349335355_Assessing_the_spatio-temporal_spread_of_COVID-19_via_compartmental_models_with_diffusion_in_Italy_USA_and_Brazil
@Article{Grave_2021,
  author  = {Mal{\'{u}} Grave and Alex Viguerie and Gabriel F. Barros and Alessandro Reali and Alvaro L. G. A. Coutinho},
  title   = {{Assessing the spatio-temporal spread of COVID-19 via compartmental models with diffusion in Italy, USA, and Brazil}},
  journal = {Archives of Computational Methods in Engineering},
  month   = oct,
  year    = 2021,
  volume  = 28,
  number  = 6,
  pages   = {4205--4223},
  note    = {\url{https://doi.org/10.1007/s11831-021-09627-1}, ArXiv e-print: \url{https://arxiv.org/abs/2102.07208}}
}

% MOOSE/RHEA
% "RHEA is based on MOOSE's modular ecosystem..."
@Article{Espejo_2021,
  author  = {Jos{\'{e}} M. {Bast\'{\i}as Espejo} and Andy Wilkins and Gabriel Rau and Philipp Blum},
  title   = {{RHEA v1.0: Enabling fully coupled simulations with hydro-geomechanical heterogeneity}},
  journal = {Geoscientific Model Development},
  month   = oct,
  year    = 2021,
  volume  = 14,
  number  = 10,
  pages   = {6257--6272},
  note    = {\url{https://doi.org/10.5194/gmd-14-6257-2021}}
}

% MOOSE
% "... code based on the finite element method and the MOOSE framework is implemented to solve all coupled PDEs..."
@Article{Tu_2021,
  author  = {Qingsong Tu and Tan Shi and Srinath Chakravarthy and Gerbrand Ceder},
  title   = {Understanding metal propagation in solid electrolytes due to mixed ionic-electronic conduction},
  journal = {Matter},
  month   = oct,
  year    = 2021,
  volume  = 4,
  number  = 10,
  pages   = {3248--3268},
  note    = {\url{https://doi.org/10.1016/j.matt.2021.08.004}}
}

% MOOSE
% "The user element for dislocations is developed and the finite element simulations are performed using the open source software MOOSE"
@Article{XZhou_2021,
  author  = {Xiandong Zhou and Christoph Reimuth and Peter Stein and Bai-Xiang Xu},
  title   = {Driving forces on dislocations: finite element analysis in the context of the non-singular dislocation theory},
  journal = {Archive of Applied Mechanics},
  month   = nov,
  year    = 2021,
  volume  = 91,
  number  = 11,
  pages   = {4499--4516},
  note    = {\url{https://doi.org/10.1007/s00419-021-02017-w}}
}

% MOOSE/phase_field
@Article{Simon_2021,
  author  = {Pierre-Cl{\'{e}}ment A. Simon and Larry K. Aagesen and Andrea M. Jokisaari and Long-Qing Chen and Mark R. Daymond and Arthur T. Motta and Michael R. Tonks},
  title   = {{Investigation of $\delta$ zirconium hydride morphology in a single crystal using quantitative phase field simulations supported by experiments}},
  journal = {Journal of Nuclear Materials},
  month   = dec,
  year    = 2021,
  volume  = 557,
  pages   = {153303 (25 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153303}}
}

% MOOSE/Griffin
@TechReport{Shemon_2021,
  author      = {Emily Shemon and Yiqi Yu and Hansol Park and Colin Brennan},
  title       = {{Assessment of fast reactor hot channel factor calculation capability in Griffin and NekRS}},
  institution = {Argonne National Laboratory},
  day         = 15,
  month       = sep,
  year        = 2021,
  number      = {ANL/NSE-21/42},
  note        = {\url{https://doi.org/10.2172/1820633}}
}

% MOOSE/Griffin
% https://www.osti.gov/biblio/1822446
@TechReport{YWang_2021b,
  author      = {Yaqi Wang and Changho Lee and Yeon Sang Jung and Zachary Price and Joshua Hanophy and Logan Harbour and Hansol Park and Javier Ortensi},
  title       = {{Performance improvements for the Griffin transport solvers}},
  institution = {Idaho National Laboratory},
  day         = 1,
  month       = sep,
  year        = 2021,
  number      = {INL/EXT-21-64272},
  note        = {\url{https://doi.org/10.2172/1822446}}
}

% MOOSE/CATS
% "Built on the MOOSE framework"
% https://cleers.org/wp-content/uploads/formidable/3/Ladshaw_21CLEERS_web.pdf
@Misc{Ladshaw_2021,
  author       = {Austin Ladshaw and Josh Pihl},
  title        = {{Development of coupled models for NH$_3$ capacity and SCR on Cu-SSZ-13 at various aging conditions and temperatures}},
  month        = sep,
  year         = 2021,
  howpublished = {Presentation at CLEERS Workshop},
  note         = {\url{https://tinyurl.com/3xzu3cpe}}
}

% MOOSE
% "the ... model is implemented into (MOOSE)"
@Article{Rezaei_2021,
  author  = {Shahed Rezaei and Armin Asheri and Bai-Xiang Xu},
  title   = {{A consistent framework for chemo-mechanical cohesive fracture and its application in solid-state batteries}},
  journal = {Journal of the Mechanics and Physics of Solids},
  month   = dec,
  year    = 2021,
  volume  = 157,
  pages   = {104612 (27 pages)},
  note    = {\url{https://doi.org/10.1016/j.jmps.2021.104612}}
}

% libMesh/RB
% "For offline and online CRB modeling, we used libMesh ... and rbOOmit ..."
@Article{Kang_2021,
  author  = {Shinseong Kang and Kyunghoon Lee},
  title   = {Real-time, high-fidelity linear elastostatic beam models for engineering education},
  journal = {Journal of Mechanical Science and Technology},
  month   = aug,
  year    = 2021,
  volume  = 35,
  number  = 8,
  pages   = {3483--3495},
  note    = {\url{https://doi.org/10.1007/s12206-021-0721-y}}
}

% BISON
% "An example of the cladding hoop stress calculated by EPRI with BISON is shown in Fig. 10"
@Article{Konarski_2021,
  author  = {Piotr Konarski and C{\'{e}}dric Cozzo and Grigori Khvostov and Hakim Ferroukhi},
  title   = {Spent nuclear fuel in dry storage conditions -- current trends in fuel performance modeling},
  journal = {Journal of Nuclear Materials},
  month   = nov,
  year    = 2021,
  volume  = 555,
  pages   = {153138 (26 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153138}}
}

% MOOSE/Pronghorn
% "The temperature profiles used as boundary conditions for the second goal are obtained by performing a simulation of a PLOFC accident using Pronghorn."
@Article{Freile_2021,
  author  = {Ramiro Freile and Mauricio Tano and Paolo Balestra and Sebastian Schunert and Mark Kimber},
  title   = {{Improved natural convection heat transfer correlations for reactor cavity cooling systems of high-temperature gas-cooled reactors: From computational fluid dynamics to Pronghorn}},
  journal = {Annals of Nuclear Energy},
  month   = dec,
  year    = 2021,
  volume  = 163,
  pages   = {108547 (18 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2021.108547}}
}

% MOOSE
% "... (MOOSE) ... is adopted in the simulations described hereafter"
@Article{Gao_2021b,
  author  = {Yuan Gao and Mason A. Dearborn and Sagar Vyas and Aditya Kumar and Julie Hemmer and Zhao Wang and Qiong Wu and Omar Alshangiti and Jeffrey S. Moore and Aaron P. Esser-Kahn and Philippe H. Geubelle},
  title   = {Manipulating frontal polymerization and instabilities with phase-changing microparticles},
  journal = {The Journal of Physical Chemistry B},
  month   = jul,
  year    = 2021,
  volume  = 125,
  number  = 27,
  pages   = {7537--7545},
  note    = {\url{https://doi.org/10.1021/acs.jpcb.1c03899}}
}

% MOOSE
% "the coupled set of Eqs. 1 and 2 is solved using ... (FEM) in MOOSE"
@Article{Kunwar_2021,
  author  = {Anil Kunwar and Prafulla Bahadur Malla and Junhao Sun and Lin Qu and Haitao Ma},
  title   = {{Convolutional neural network model for synchrotron radiation imaging datasets to automatically detect interfacial microstructure: An in situ process monitoring tool during solar PV ribbon fabrication}},
  journal = {Solar Energy},
  month   = aug,
  year    = 2021,
  volume  = 224,
  pages   = {230--244},
  note    = {\url{https://doi.org/10.1016/j.solener.2021.06.006}}
}

% MOOSE
% "The physical description of the numerical model ... is applied through ... GOLEM, which is based on MOOSE"
@Article{Konrad_2021,
  author  = {Florian Konrad and Alexandros Savvatis and Denise Degen and Florian Wellmann and Florian Einsiedl and Kai Zosseder},
  title   = {{Productivity enhancement of geothermal wells through fault zones: Efficient numerical evaluation of a parameter space for the Upper Jurassic aquifer of the North Alpine Foreland Basin}},
  journal = {Geothermics},
  month   = sep,
  year    = 2021,
  volume  = 95,
  pages   = {102119 (64 pages)},
  note    = {\url{https://doi.org/10.1016/j.geothermics.2021.102119}}
}

% MOOSE
% "All FE simulations were performed using ... (MOOSE)"
@Article{Ellis_2021,
  author  = {Brett D. Ellis and Hasan Haider and Matthew W. Priddy and Anirban Patra},
  title   = {{Integrated computational design of three-phase Mo-Si-B alloy turbine blade for high-temperature aerospace applications}},
  journal = {Integrating Materials and Manufacturing Innovation},
  month   = jun,
  year    = 2021,
  volume  = 10,
  number  = 2,
  pages   = {245--264},
  note    = {\url{https://doi.org/10.1007/s40192-021-00207-6}}
}

% MOOSE/phase_field
% "... the computation tool for phase-field simulations is developed using MOOSE ..."
@Article{Chatterjee_2021,
  author  = {Sourav Chatterjee and Nele Moelans},
  title   = {{A grand-potential based phase-field approach for simulating growth of intermetallic phases in multicomponent alloy systems}},
  journal = {Acta Materialia},
  month   = mar,
  year    = 2021,
  volume  = 206,
  pages   = {116630 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.actamat.2021.116630}}
}

% MOOSE
% "This work models the Stokes problem with the Navier-Stokes module in MOOSE..."
@Article{Nicolas_2021,
  author  = {Andrea Nicolas and Mark C. Messner and T.-L. Sham},
  title   = {A method for predicting failure statistics for steady state elevated temperature structural components},
  journal = {International Journal of Pressure Vessels and Piping},
  month   = aug,
  year    = 2021,
  volume  = 192,
  pages   = {104363 (8 pages)},
  note    = {\url{https://doi.org/10.1016/j.ijpvp.2021.104363}}
}

% MOOSE
% "In the present work, we use the FEM framework MOOSE ... with adaptive meshing and time stepping to solve the PF Eq. ..."
@Article{Li_2021,
  author  = {Qun Li and Robert S. Averback and Pascal Bellon},
  title   = {{Compositional patterning in irradiated alloys: Effective potentials and effective interfacial energy}},
  journal = {Physical Review B},
  month   = mar,
  year    = 2021,
  volume  = 103,
  number  = 10,
  pages   = {104110 (20 pages)},
  note    = {\url{https://doi.org/10.1103/PhysRevB.103.104110}}
}

% MOOSE/phase_field
% "The phase-field fracture model was implemented using ... (MOOSE) ..."
@Article{Rezwan_2021,
  author  = {Aashique A. Rezwan and Andrea M. Jokisaari and Michael R. Tonks},
  title   = {Modeling brittle fracture due to anisotropic thermal expansion in polycrystalline materials},
  journal = {Computational Materials Science},
  month   = jun,
  year    = 2021,
  volume  = 194,
  pages   = {110407 (9 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110407}}
}

% MOOSE/phase_field
% "We use an application within the MOOSE framework ... for our simulations"
@Article{Wu_2021,
  author  = {W. Wu and D. Montiel and J. E. Guyer and P. W. Voorhees and J. A. Warren and D. Wheeler and L. Gr{\'{a}}n{\'{a}}sy and T. Pusztai and O. G. Heinonen},
  title   = {Phase field benchmark problems for nucleation},
  journal = {Computational Materials Science},
  month   = jun,
  year    = 2021,
  volume  = 193,
  pages   = {110371 (11 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110371}}
}

% MOOSE
% "Time evolution of the system was performed according to the Cahn-Hilliard equation using ... MOOSE"
%  https://www.researchgate.net/publication/349949577_Characterization_of_the_Strain_Rate_Effect_under_Uniaxial_Loading_for_Nanoporous_Gold
@Article{Voyiadjis_2021,
  author  = {George Z. Voyiadjis and Mohammed H. Saffarini and Carlos Ruestes},
  title   = {Characterization of the strain rate effect under uniaxial loading for nanoporous gold},
  journal = {Computational Materials Science},
  month   = jun,
  year    = 2021,
  volume  = 194,
  pages   = {110425 (17 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110425}, ResearchGate Preprint: \url{https://tinyurl.com/882pcmfd}}
}

% MOOSE/phase_field
% "The governing equations ... are solved using ... MOOSE"
@Article{Toghraee_2021,
  author  = {Alireza Toghraee and Jacob Bair and Mohsen {Asle Zaeem}},
  title   = {{Effects of applied load on formation and reorientation of zirconium hydrides: A multiphase field modeling study}},
  journal = {Computational Materials Science},
  month   = may,
  year    = 2021,
  volume  = 192,
  pages   = {110367 (7 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110367}, ArXiv e-print: \url{https://arxiv.org/abs/1706.01097}}
}

% libmesh
% "The mesh is further optimized with libMesh"
@Article{Villada_2021,
  author  = {Stiven Villada-Gil and Viviana Palacio-Betancur and Julio C. Armas-P{\'{e}}rez and Juan J. {de Pablo} and Juan Pablo Hern{\'{a}}ndez-Ortiz},
  title   = {{Directing the far-from-equilibrium assembly of nanoparticles in confined liquid crystals by hydrodynamic fields}},
  journal = {Soft Matter},
  month   = mar,
  year    = 2021,
  volume  = 17,
  number  = 12,
  pages   = {3463--3472},
  note    = {\url{https://doi.org/10.1039/D0SM02221G}}
}

% MOOSE
% Numerical simulation has been performed with the finite element method in the MOOSE framework"
@Article{Liu_2021,
  author  = {Yao Liu and Yang Bai and Wolfram Jaegermann and Ren{\'{e}} Hausbrand and Bai-Xiang Xu},
  title   = {{Impedance modeling of solid-state electrolytes: Influence of the contacted space charge layer}},
  journal = {ACS Applied Materials \& Interfaces},
  month   = jan,
  year    = 2021,
  volume  = 13,
  number  = 4,
  pages   = {5895--5906},
  note    = {\url{https://doi.org/10.1021/acsami.0c22986}}
}

% BISON
% "The thermomechanical analysis relies on the BISON fuel performance analysis tool"
@Article{Terrani_2021,
  author  = {K. A. Terrani and B. C. Jolly and M. P. Trammell and G. Vasadevamurthy and D. Schappel and B. Ade and G. W. Helmreich and H. Wang and A. Marquiz Rossy and B. R. Betzler and A. T. Nelson},
  title   = {{Architecture and properties of TCR fuel form}},
  journal = {Journal of Nuclear Materials},
  month   = apr,
  year    = 2021,
  volume  = 547,
  pages   = {152781 (9 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.152781}}
}

% MOOSE
% To determine the thermal stress ... we solve a set of two ... (PDEs) by using the finite element methods in ... (MOOSE)"
@Article{Goncharov_2021,
  author  = {Vitaliy G. Goncharov and Nian Wei and Miu Lun Lau and Sue M. Ennaceur and Albert Migliori and Hongwu Xu and Min Long and Xiaofeng Guo},
  title   = {Elastic and thermodynamic properties of cerium doped yttrium aluminum garnets},
  journal = {Journal of the American Ceramic Society},
  month   = jul,
  year    = 2021,
  volume  = 104,
  number  = 7,
  pages   = {3478--3496},
  note    = {\url{https://doi.org/10.1111/jace.17679}}
}

% MOOSE/MARMOT
% "... a phase-field model of the fission gas bubble microstructure in nuclear fuel is developed ... in ... Marmot"
@Article{Aagesen_2021,
  author  = {Larry K. Aagesen and Sudipta Biswas and Wen Jiang and David Andersson and Michael W. D. Cooper and Christopher Matthews},
  title   = {{Phase-field simulations of fission gas bubbles in high burnup UO$_2$ during steady-state and LOCA transient conditions}},
  journal = {Journal of Nuclear Materials},
  month   = dec,
  year    = 2021,
  volume  = 557,
  pages   = {153267 (10 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153267}}
}

% MOOSE/BISON
@TechReport{Cunningham_2021,
  author      = {Kaylee M. Cunningham and Robert A. Lefebvre and Michael R. Tonks and Jacob A. Hirschhorn and Ian T. Greenquist and Jeffrey J. Powers},
  title       = {{Streamlining the coupling of BISON and Dakota through the NEAMS Workbench}},
  institution = {Oak Ridge National Laboratory},
  day         = 1,
  month       = jul,
  year        = 2021,
  number      = {ORNL/TM-2021/1958},
  note        = {\url{https://doi.org/10.2172/1813199}}
}

% MOOSE/BISON
@Article{Beausoleil_2021,
  author  = {G. L. Beausoleil and C. Petrie and W. Williams and A. Jokisaari and L. Capriotti and S. Novascone and C. Adkins and M. Kerr},
  title   = {Integrating advanced modeling and accelerated testing for a modernized fuel qualification paradigm},
  journal = {Nuclear Technology},
  month   = oct,
  year    = 2021,
  volume  = 207,
  number  = 10,
  pages   = {1491--1510},
  note    = {\url{https://doi.org/10.1080/00295450.2020.1826272}}
}

% libMesh
% "Libmesh is a C++ finite element library used in the code FEMuS to generate and handle numerical meshes with multiple level refinements"
@InProceedings{Chierici_2021,
  author    = {A. Chierici and G. Barbi and G. Bornia and D. Cerroni and L. Chirco and R. Vi{\'{a}} and V. Giovacchini and S. Manservisi and R. Scardovelli and A. Cervone},
  title     = {{FEMuS-Platform: A numerical platform for multiscale and multiphysics code coupling}},
  booktitle = {{9th edition of the International Conference on Computational Methods for Coupled Problems in Science and Engineering (COUPLED PROBLEMS 2021)}},
  address   = {Virtual, Online},
  editor    = {E. O{\~{n}}ate and M. Papadrakakis and B. Schrefler},
  pages     = {xx (12 pages)},
  month     = jun # {~13--16,},
  year      = 2021,
  note      = {IS15: Coupling Strategies in Multi-Physics Codes, \url{https://doi.org/10.23967/coupled.2021.027}}
}

% MOOSE
% Detailed overview of virtual reactor simulators in which MOOSE is
% mentioned extensively.
@Article{XWang_2021,
  author  = {Xianmeng Wang and Mingyu Wu and Xiao He and Zhaoshun Wang and Yinyu Cai and Xu Lu and Suxuan Guo},
  title   = {Multi-physics coupling simulation in virtual reactors},
  journal = {Simulation},
  month   = oct,
  year    = 2021,
  volume  = 97,
  number  = 10,
  pages   = {687--702},
  note    = {\url{https://doi.org/10.1177/0037549719881204}, Special issue: High Performance Computing for Advanced Modeling and Simulation in Nuclear Energy}
}

% MOOSE/Mastodon
% https://www.researchgate.net/publication/353958915_Seismic_fluid-structure_interaction_in_tanks_using_an_acoustic_formulation_A_verification_and_validation_study
% author:somayajulu author:bolisetti seismic fluid-structure interaction
@Misc{Dhulipala_2021b,
  author       = {Somayajulu L. N. Dhulipala and Chandrakanth Bolisetti and Lynn B. Munday and William M. Hoffman and Ching-Ching Yu and Faizan Ul Haq Mir and Fande Kong and Alexander D. Lindsay and Andrew S. Whittaker},
  title        = {Seismic fluid-structure interaction in tanks using an acoustic formulation: A verification and validation study},
  month        = aug,
  year         = 2021,
  howpublished = {ResearchGate Preprint},
  note         = {\url{https://tinyurl.com/x5bnv64n}}
}

% libmesh/IBAMR
% "The code developed in this work, BeatIt ... relies on the parallel C++ finite element library libMesh"
% https://www.researchgate.net/publication/341376299_Adherens_Junction_Engagement_Regulates_Functional_Patterning_of_the_Cardiac_Pacemaker_Cell_Lineage
@Article{Thomas_2021,
  author  = {Kandace Thomas and Trevor Henley and Simone Rossi and M. Joseph Costello and William Polacheck and Boyce E. Griffith and Michael Bressan},
  title   = {Adherens junction engagement regulates functional patterning of the cardiac pacemaker cell lineage},
  journal = {Developmental Cell},
  month   = may,
  year    = 2021,
  volume  = 56,
  number  = 10,
  pages   = {1498--1511.E7},
  note    = {\url{https://doi.org/10.1016/j.devcel.2021.04.004}}
}

% MOOSE
% "A custom class was generated by extending the InitialCondition class of the MOOSE framework ..."
@Article{Kelley_2021,
  author  = {Garrett M. Kelley and Mamidala Ramulu},
  title   = {Algorithm development for generation of powder particles for use in numerical simulations of powder bed fusion additive manufacturing processes},
  journal = {Journal of Physics: Conference Series},
  month   = aug,
  year    = 2021,
  volume  = 1995,
  pages   = {012063 (6 pages)},
  note    = {\url{https://doi.org/10.1088/1742-6596/1995/1/012063}, Conference: 3rd International Conference on Computer Modeling, Simulation and Algorithm (CMSA2021) 4--5 July 2021, Shanghai, China}
}

% MOOSE/RELAP-7
@Article{Cavaluzzi_2021,
  author  = {Jack Cavaluzzi and David Andr{\v{s}} and Karen {Vierow Kirkland}},
  title   = {{Two-zone stratified wetwell model development and implementation for RELAP-7}},
  journal = {Annals of Nuclear Energy},
  month   = dec,
  year    = 2021,
  volume  = 164,
  pages   = {108592 (15 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2021.108592}}
}

% MOOSE
% "... (MOOSE) is used as a tool to solve the balance equations for point defects numerically."
@Article{Ozturk_2021,
  author  = {Abdurrahman Ozturk and Merve Gencturk and Karim Ahmed},
  title   = {{Surface and size effects on the behaviors of point defects in irradiated crystalline solids}},
  journal = {Frontiers in Materials},
  month   = aug,
  year    = 2021,
  volume  = 8,
  pages   = {684862 (23 pages)},
  note    = {\url{https://doi.org/10.3389/fmats.2021.684862}}
}

% MOOSE/BISON
% "Tritium transport behavior in component-level models of fission and fusion systems
% was simulated and assessed using the hydrogen transport code in the BISON fuel
% performance code"
@mastersthesis{ONeal_thesis,
  author = {Miles Landon ONeal},
  school = {University of Tennessee, Knoxville},
  title  = {Assessment of component level tritium transport for fission and fusion systems},
  note   = {\url{https://trace.tennessee.edu/utk_gradthes/6135/}},
  month  = aug,
  year   = 2021
}

% MOOSE/ZAPDOS
% "we can use ZAPDOS to simulate the plasma formation and the corresponding electric power deposition."
@Article{Ezzat_2021,
  author  = {Mohamed Ezzat and Daniel Vogler and Martin O. Saar and Benjamin M. Adams},
  title   = {{Simulating plasma formation in pores under short electric pulses for plasma pulse geo drilling (PPGD)}},
  journal = {Energies},
  month   = aug,
  year    = 2021,
  volume  = 14,
  number  = 16,
  pages   = {4717 (23 pages)},
  note    = {\url{https://doi.org/10.3390/en14164717}}
}

% MOOSE
% "The MOOSE finite element software ... was used to perform the time evolution of the system"
% https://www.researchgate.net/publication/353666053_Temperature_Effect_on_Nanoporous_Gold_under_Uniaxial_Tension_and_Compression
@Article{Saffarini_2021b,
  author  = {Mohammed H. Saffarini and George Z. Voyiadjis and Carlos J. Ruestes},
  title   = {Temperature effect on nanoporous gold under uniaxial tension and compression},
  journal = {Computational Materials Science},
  month   = dec,
  year    = 2021,
  volume  = 200,
  pages   = {110766 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110766}, ResearchGate Preprint: \url{https://tinyurl.com/2mcjpnmz}}
}

% Maybe MOOSE/BISON
@Article{Capps_2021,
  author  = {Nathan Capps and Ryan Sweet and Jason Harp and Christian M. Petrie},
  title   = {{High-burnup fuel stress analysis prior to and during a LOCA transient}},
  journal = {Journal of Nuclear Materials},
  month   = dec,
  year    = 2021,
  volume  = 556,
  pages   = {153194 (11 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153194}}
}

% MOOSE
% "We solve the CHE within the MOOSE framework ... using the built-in SplitCHParsed kernel and Newton solver."
@Article{Mao_2021,
  author  = {Zirui Mao and Michael J. Demkowicz},
  title   = {{Mobility inference of the Cahn--Hilliard equation from a model experiment}},
  journal = {Journal of Materials Research},
  month   = jul,
  year    = 2021,
  volume  = 36,
  number  = 13,
  pages   = {2830--2842},
  note    = {\url{https://doi.org/10.1557/s43578-021-00266-7}}
}

% MOOSE/Pronghorn
% https://www.researchgate.net/publication/353526670_Enhancing_Reactor_Cavity_Cooling_System_Modeling_in_Pronghorn_for_High_Temperature_Gas_Reactors/references
@InProceedings{Freile_2020,
  author    = {Ramiro Freile and Sebastian Schunert and Paolo Balestra and Mark Kimber and Mauricio Tano},
  title     = {{Enhancing reactor cavity cooling system modeling in Pronghorn for high temperature gas reactors}},
  booktitle = {{Proceedings of the International Conference on High Temperature Reactor Technology (HTR 2021)}},
  address   = {Virtual, Online},
  month     = jun # {~2--5,},
  year      = 2021,
  note      = {Paper 74, \url{https://tinyurl.com/5rx89sk9}}
}

% MOOSE
@Article{AbouJaoude_2021b,
  author  = {A. Abou-Jaoude and S. Harper and G. Giudicelli and P. Balestra and S. Schunert and N. Martin and A. Lindsay and M. Tano and R. Freile},
  title   = {{A workflow leveraging MOOSE transient multiphysics simulations to evaluate the impact of thermophysical property uncertainties on molten-salt reactors}},
  journal = {Annals of Nuclear Energy},
  month   = dec,
  year    = 2021,
  volume  = 163,
  pages   = {108546 (15 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2021.108546}}
}

% MOOSE
% A case study based on the Bree cylinder ... was implemented in two leading open-source FEA tools, the MOOSE framework ..."
% https://www.nrel.gov/docs/fy21osti/79323.pdf
@TechReport{Turchi_2021,
  author      = {Craig Turchi and Samuel Gage and Janna Martinek and Sameer Jape and Ken Armijo and Joe Coventry and John Pye and Charles-Alexis Asselineau and Felix Venn and William Logie and Armando Fontalvo and Shuang Wang and Robbie McNaughton and Daniel Potter and Theodore Steinberg and Geoffrey Will},
  title       = {{CSP Gen3: Liquid-Phase Pathway to SunShot}},
  institution = {National Renewable Energy Laboratory},
  day         = 6,
  month       = jul,
  year        = 2021,
  number      = {NREL/TP-5700-79323},
  note        = {\url{https://doi.org/10.2172/1807668}}
}

% MOOSE
% "The FE simulations were performed using ... (MOOSE)."
@Article{Bhutada_2021,
  author  = {Akshay Bhutada and Sunni Kumar and Dayalan Gunasegaram and Alankar Alankar},
  title   = {Machine learning based methods for obtaining correlations between microstructures and thermal stresses},
  journal = {Metals},
  month   = jul,
  year    = 2021,
  volume  = 11,
  number  = 8,
  pages   = {1167 (17 pages)},
  note    = {\url{https://doi.org/10.3390/met11081167}}
}

% MOOSE/BISON
% "A metallic fuel benchmark case was developed for the fuel performance code BISON"
@Article{Greenquist_2021,
  author  = {Ian Greenquist and Jeffrey J. Powers},
  title   = {{25-Pin metallic fuel performance benchmark case based on the EBR-II X430 experiments series}},
  journal = {Journal of Nuclear Materials},
  month   = dec,
  year    = 2021,
  volume  = 556,
  pages   = {153211 (35 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153211}}
}

% MOOSE/INS
% "This work utilizes a modified version of the Incompressible Navier Stokes module in MOOSE ..."
% https://www.researchgate.net/publication/353376396_A_Probabilistic_Margin_Assessment_Of_The_ASME_Section_III_Division_5_Primary_Load_Design_Rules_For_Class_A_Components
@InProceedings{Nicolas_2021b,
  author    = {Andrea Nicolas and Mark C. Messner and T.-L. Sham},
  title     = {{A probabilistic margin assessment of the ASME Section III, Division 5 primary load design rules for Class A components}},
  booktitle = {{Proceedings of the ASME 2021 Pressure Vessels \& Piping Conference (PVP2021)}},
  address   = {Virtual, Online},
  pages     = {PVP2021--61570 (8 pages)},
  month     = jul # {~12--16,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/vuu3wbfs}}
}

% MOOSE/INS
% This is an expanded version of Nicolas_2021b with additional results
@TechReport{Nicolas_2021c,
  author      = {Andrea Nicolas and Mark C. Messner and T.-L. Sham},
  title       = {{Comprehensive margin assessment of the ASME Section III, Division 5, Class A primary load design rules}},
  institution = {Argonne National Laboratory},
  day         = sep,
  month       = 1,
  year        = 2021,
  number      = {ANL-ART-226},
  note        = {\url{https://doi.org/10.2172/1817212}}
}

% MOOSE
% "... simulation is performed within the MOOSE framework and associated libraries..."
@Article{Reimuth_2021,
  author  = {Christoph Reimuth and Binbin Lin and Yangyiwei Yang and Peter Stein and Xiandong Zhou and Bai-Xiang Xu},
  title   = {Chemo-mechanical study of dislocation mediated ion diffusion in lithium-ion battery materials},
  journal = {Journal of Applied Physics},
  month   = jul,
  year    = 2021,
  volume  = 130,
  number  = 3,
  pages   = {035103 (13 pages)},
  note    = {\url{https://doi.org/10.1063/5.0049502}}
}

% MOOSE/BISON
% The authors don't use BISON but this is a review article where BISON features heavily.
@Article{Ding_2021,
  author  = {Ming Ding and Xuhua Zhou and Haojie Zhang and Haozhi Bian and Qiang Yan},
  title   = {{A review of the development of nuclear fuel performance analysis and codes for PWRs}},
  journal = {Annals of Nuclear Energy},
  month   = dec,
  year    = 2021,
  volume  = 163,
  pages   = {108542 (16 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2021.108542}}
}

% MOOSE/FERRET
% "... we used the FERRET code package, based on ... (MOOSE) framework ..., to do all the numerical simulations."
@Article{Zhu_2021,
  author  = {Daopei Zhu and Haocheng Yan and Siyuan Tian and Zhangli Wang},
  title   = {Size, shape, and material effects in ferroelectric octahedral nanoparticles},
  journal = {Journal of Nanomaterials},
  month   = jul,
  year    = 2021,
  volume  = 2021,
  pages   = {2371168 (8 pages)},
  note    = {\url{https://doi.org/10.1155/2021/2371168}}
}

% MOOSE
% "Simulations were conducted using the open-source finite element code MOOSE..."
@Article{Sheldon_2021b,
  author  = {Heather A. Sheldon and Andy Wilkins and Christopher P. Green},
  title   = {Recovery efficiency in high-temperature aquifer thermal energy storage systems},
  journal = {Geothermics},
  month   = nov,
  year    = 2021,
  volume  = 96,
  pages   = {102173 (18 pages)},
  note    = {\url{https://doi.org/10.1016/j.geothermics.2021.102173}}
}

% MOOSE/DireWolf
@Article{Matthews_2021,
  author  = {Christopher Matthews and Vincent Labour{\'{e}} and Mark DeHart and Joshua Hansel and David Andr{\v{s}} and Yaqi Wang and Javier Ortensi and Richard C. Martineau},
  title   = {{Coupled multiphysics simulations of heat pipe microreactors using DireWolf}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1142--1162},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2021.1906474}}
}

% MOOSE
@Article{Gaston_2021,
  author  = {Derek R. Gaston and Benoit Forget and Kord S. Smith and Logan H. Harbour and Gavin K. Ridley and Guillaume G. Giudicelli},
  title   = {{Method of Characteristics for 3D, full-core neutron transport on unstructured mesh}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {931--953},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2021.1871995}}
}

% MOOSE/RACCOON
% "RACCOON is built upon the MOOSE framework..."
% ResearchGate Preprint: https://www.researchgate.net/publication/350341453_A_Variational_Phase-Field_Model_For_Ductile_Fracture_with_Coalescence_Dissipation
@Article{Hu_2021,
  author  = {Tianchen Hu and Brandon Talamini and Andrew J. Stershic and Michael R. Tupek and John E. Dolbow},
  title   = {A variational phase-field model for ductile fracture with coalescence dissipation},
  journal = {Computational Mechanics},
  month   = aug,
  year    = 2021,
  volume  = 68,
  number  = 2,
  pages   = {311--335},
  note    = {\url{https://doi.org/10.1007/s00466-021-02033-1}, ArXiv e-print: \url{https://arxiv.org/abs/2103.12524}}
}

% MOOSE
% "... the fuel performance tool BISON and the mesoscale reactor materials tool MARMOT are used to develop a multiscale model of thermal transport..."
@Article{Sessim_2021,
  author  = {Marina Sessim and Michael R. Tonks},
  title   = {{Multiscale simulations of thermal transport in W-UO$_2$ CERMET fuel for nuclear thermal propulsion}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1004--1014},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2021.1910005}}
}

% MOOSE/Grizzly
@Article{Spencer_2021,
  author  = {Benjamin W. Spencer and William M. Hoffman and Sudipta Biswas and Wen Jiang and Alain Giorla and Marie A. Backman},
  title   = {{Grizzly and BlackBear: Structural component aging simulation codes}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {981--1003},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1868278}}
}

% MOOSE/Rattlesnake
@Article{YWang_2021,
  author  = {Yaqi Wang and Sebastian Schunert and Javier Ortensi and Vincent Labour{\'{e}} and Mark DeHart and Zachary Prince and Fande Kong and Jackson Harter and Paolo Balestra and Frederick Gleicher},
  title   = {{Rattlesnake: A MOOSE-based multiphysics multischeme radiation transport application}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1047--1072},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1843348}}
}

% MOOSE/Sockeye
@Article{Hansel_2021,
  author  = {Joshua E. Hansel and Ray A. Berry and David Andr{\v{s}} and Matthias S. Kunick and Richard C. Martineau},
  title   = {{Sockeye: A one-dimensional, two-phase, compressible flow heat pipe application}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1096--1117},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1861879}}
}

% MOOSE
@Article{Permann_2021,
  author  = {Cody J. Permann and Andrea M. Jokisaari and Michael R. Tonks and Daniel Schwen and Derek R. Gaston and Fande Kong and Robert Hiromoto and Richard C. Martineau},
  title   = {Scalable feature tracking for finite element meshes demonstrated with a novel phase-field grain subdivision model},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {885--904},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1843893}}
}

% MOOSE/BISON
@Article{Williamson_2021,
  author  = {Richard L. Williamson and Jason D. Hales and Stephen R. Novascone and Giovanni Pastore and Kyle A. Gamble and Benjamin W. Spencer and Wen Jiang and Stephanie A. Pitts and Albert Casagranda and Daniel Schwen and Adam X. Zabriskie and Aysenur Toptan and Russell Gardner and Christoper Matthews and Wenfeng Liu and Hailong Chen},
  title   = {{BISON: A flexible code for advanced simulation of the performance of multiple nuclear fuel forms}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {954--980},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1836940}}
}

% MOOSE
@Article{Lindsay_2021,
  author  = {Alexander Lindsay and Roy Stogner and Derek Gaston and Daniel Schwen and Christopher Matthews and Wen Jiang and Larry K. Aagesen and Robert Carlsen and Fande Kong and Andrew Slaughter and Cody Permann and Richard Martineau},
  title   = {{Automatic differentiation in MetaPhysicL and its applications in MOOSE}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {905--922},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1838877}}
}

% MOOSE/Pronghorn
@Article{Novak_2021b,
  author  = {A. J. Novak and R. W. Carlsen and S. Schunert and P. Balestra and D. Reger and R. N. Slaybaugh and R. C. Martineau},
  title   = {{Pronghorn: A multidimensional coarse-mesh application for advanced reactor thermal hydraulics}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1015--1046},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1825307}}
}

% MOOSE
@Article{Slaughter_2021,
  author  = {Andrew E. Slaughter and Cody J. Permann and Jason M. Miller and Brian K. Alger and Stephen R. Novascone},
  title   = {{Continuous integration, in-code documentation, and automation for nuclear quality assurance conformance}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {923--930},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1826804}}
}

% MOOSE
@Article{Merzari_2021,
  author  = {Elia Merzari and Haomin Yuan and Misun Min and Dillon Shaver and Ronald Rahaman and Patrick Shriwise and Paul Romano and Alberto Talamo and Yu-Hsiang Lan and Derek Gaston and Richard Martineau and Paul Fischer and Yassin Hassan},
  title   = {{Cardinal: A lower length-scale multiphysics simulator for pebble-bed reactors}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1118--1141},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1824471}}
}

% MOOSE/Mastodon
@Article{Veeraraghavan_2021,
  author  = {Swetha Veeraraghavan and Chandrakanth Bolisetti and Andrew Slaughter and Justin Coleman and Somayajulu Dhulipala and William Hoffman and Kyungtae Kim and Efe Kurt and Robert Spears and Lynn Munday},
  title   = {{MASTODON: An open-source software for seismic analysis and risk assessment of critical infrastructure}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2021,
  volume  = 207,
  number  = 7,
  pages   = {1073--1095},
  note    = {Special issue on the MOOSE Multiphysics Computational Framework, \url{https://doi.org/10.1080/00295450.2020.1807282}}
}

% MOOSE
% "... (MOOSE) ... is adopted in this study."
@Article{Gao_2021,
  author  = {Yuan Gao and Fahima Shaon and Aditya Kumar and Samuel Bynum and Daniel Gary and David Sharp and John A. Pojman and Philippe H. Geubelle},
  title   = {Rapid frontal polymerization achieved with thermally conductive metal strips},
  journal = {Chaos: An Interdisciplinary Journal of Nonlinear Science},
  month   = jul,
  year    = 2021,
  volume  = 31,
  number  = 7,
  pages   = {073113 (9 pages)},
  note    = {\url{https://doi.org/10.1063/5.0052821}}
}

% MOOSE/BISON
@Article{Toptan_2021,
  author  = {Aysenur Toptan and Wen Jiang and Jason D. Hales and Benjamin W. Spencer and Albert Casagranda and Stephen R. Novascone},
  title   = {{FEA-aided investigation of the effective thermal conductivity in a medium with embedded spheres}},
  journal = {Nuclear Engineering and Design},
  month   = sep,
  year    = 2021,
  volume  = 381,
  pages   = {111355 (15 pages)},
  note    = {\url{https://doi.org/10.1016/j.nucengdes.2021.111355}}
}

% MOOSE/phase_field
% "The code is scripted in ... (MOOSE)."
@Article{Jarrahi_2021,
  author  = {Miad Jarrahi and Guido Bl{\"{o}}cher and Christian Kluge and Hartmut Michael Holl{\"{a}}nder},
  title   = {Elastic-plastic fracture propagation modeling in rock fracturing via punch through shear test},
  journal = {Rock Mechanics and Rock Engineering},
  month   = apr,
  year    = 2021,
  volume  = 54,
  pages   = {3135--3147},
  note    = {\url{https://doi.org/10.1007/s00603-021-02457-4}, Earth and Space Science Open Archive Preprint: \url{https://doi.org/10.1002/essoar.10502042.1}}
}

% MOOSE/Pronghorn
% https://www.researchgate.net/publication/352694523_Pronghorn_Fully_Compressible_Equation_Set_Validation_against_SANA_Open_Plenum_Experiments
@InProceedings{JieunLee_2021,
  author    = {Jieun Lee and Paolo Balestra and Sebastian Schunert and April Novak and Yassin A. Hassan and Mark D. Dehart},
  title     = {{Pronghorn fully compressible equation set validation against SANA open plenum experiments}},
  booktitle = {{Proceedings of the International Conference on High Temperature Reactor Technology (HTR 2021)}},
  address   = {Virtual Event, Indonesia},
  month     = jun # {~2--5,},
  year      = 2021,
  note      = {Paper HTR 2021-103, \url{https://tinyurl.com/hvykfvbu}}
}

% MOOSE
% "The phase-field model is numerically implemented via the finite element method within the program NIsoS developed by authors based on MOOSE framework"
@Article{Yangyiwei_2021,
  author  = {Yangyiwei Yang and Carlos Do{\~{n}}ate-Buend{\'{i}}a and Timileyin David Oyedeji and Bilal G{\"{o}}kce and Bai-Xiang Xu},
  title   = {Nanoparticle tracing during laser powder bed fusion of oxide dispersion strengthened steels},
  journal = {Materials},
  month   = jun,
  year    = 2021,
  volume  = 14,
  number  = 13,
  pages   = {3463 (24 pages)},
  note    = {\url{https://doi.org/10.3390/ma14133463}}
}

% MOOSE/BISON
@Article{Gamble_2021,
  author  = {K. A. Gamble and G. Pastore and M. W. D. Cooper and D. A. Andersson and C. Matthews and B. Beeler and L. K. Aagesen and T. Barani and D. Pizzocri},
  title   = {{Improvement of the BISON U$_3$Si$_2$ modeling capabilities based on multiscale developments to modeling fission gas behavior}},
  journal = {Journal of Nuclear Materials},
  month   = nov,
  year    = 2021,
  volume  = 555,
  pages   = {153097 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153097}}
}

% libMesh
% "To solve the Laplace equation and the Poisson equation AGATAGeFEM uses the libmesh library"
% ResearchGate Preprint: https://www.researchgate.net/publication/348294182_Pulse-shape_calculations_and_applications_using_the_AGATAGeFEM_software_package/references
@Article{Ljungvall_2021,
  author  = {J. Ljungvall},
  title   = {{Pulse-shape calculations and applications using the AGATAGeFEM software package}},
  journal = {The European Physical Journal A},
  month   = jun,
  year    = 2021,
  volume  = 57,
  number  = 6,
  pages   = {198 (22 pages)},
  note    = {\url{https://doi.org/10.1140/epja/s10050-021-00512-w}, ArXiv e-print: \url{https://arxiv.org/abs/2101.02001}}
}

% MOOSE
% "The model has been implemented in the open-source finite element (FE) package MOOSE."
@Article{Bai_2021,
  author  = {Yang Bai and David A. Santos and Shahed Rezaei and Peter Stein and Sarbajit Banerjee and Bai-Xiang Xu},
  title   = {{A chemo-mechanical damage model at large deformation: Numerical and experimental studies on polycrystalline energy materials}},
  journal = {International Journal of Solids and Structures},
  month   = oct,
  year    = 2021,
  volume  = 228,
  pages   = {111099 (16 pages)},
  note    = {\url{https://doi.org/10.1016/j.ijsolstr.2021.111099}}
}

% MOOSE
% https://www.osti.gov/biblio/1836109-multiphysics-modeling-support-nasa-nuclear-thermal-propulsion-designs
@Misc{DeHart_2021b,
  author       = {Mark D. DeHart},
  title        = {{Multiphysics modeling in support of NASA nuclear thermal propulsion designs}},
  month        = oct,
  year         = 2021,
  howpublished = {Presentation INL/MIS-21-64799},
  note         = {\url{https://tinyurl.com/yckhne2c}}
}

% MOOSE
% https://www.osti.gov/biblio/1787043-multiphysics-modeling-simulation-capabilities-based-moose
@Misc{DeHart_2021,
  author       = {Mark D. DeHart and Sebastian Schunert and Vincent M. Labour{\'{e}}},
  title        = {{Multiphysics modeling/simulation capabilities based on MOOSE}},
  month        = may,
  year         = 2021,
  howpublished = {Presentation INL/MIS-21-62907},
  note         = {\url{https://tinyurl.com/4w8frmbs}}
}

% MOOSE
% "To precisely track the different interfaces at a relatively low computational cost, the eXtended Finite Element Method (X-FEM) was applied in MOOSE."
@Article{BaillySalins_2021,
  author  = {Louis Bailly-Salins and L{\'{e}}o Borrel and Wen Jiang and Benjamin W. Spencer and Koroush Shirvan and Adrien Couet},
  title   = {{Modeling of high-temperature corrosion of zirconium alloys using the eXtended Finite Element Method (X-FEM)}},
  journal = {Corrosion Science},
  month   = aug,
  year    = 2021,
  volume  = 189,
  pages   = {109603 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.corsci.2021.109603}}
}

% MOOSE/SAM
@Article{YZhou_2021,
  author  = {Yukun Zhou and Jun Wang and Zehua Guo and Yanan He and Yapei Zhang and Suizheng Qiu and G. H. Su and Michael L. Corradini},
  title   = {{3D-2D coupling multi-dimension simulation for the heat pipe micro-reactor by MOOSE\&SAM}},
  journal = {Progress in Nuclear Energy},
  month   = aug,
  year    = 2021,
  volume  = 138,
  pages   = {103790 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.pnucene.2021.103790}}
}

% MOOSE
% "We demonstrate that a numerical solution using the MOOSE software precisely matches the analytical formulae."
@Article{Green_2021,
  author  = {Christopher P. Green and Andy Wilkins and Jonathan Ennis-King and Tara LaForce},
  title   = {{Geomechanical response due to nonisothermal fluid injection into a reservoir}},
  journal = {Advances in Water Resources},
  month   = jul,
  year    = 2021,
  volume  = 153,
  pages   = {103942 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.advwatres.2021.103942}}
}

% MOOSE
% "The finite element simulation is performed using the open-source software MOOSE"
@Article{Hofling_2021,
  author  = {Marion H{\"{o}}fling and Xiandong Zhou and Lukas M. Riemer and Enrico Bruder and Binzhi Liu and Lin Zhou and Pedro B. Groszewicz and Fangping Zhuo and Bai-Xiang Xu and Karsten Durst and Xiaoli Tan and Dragan Damjanovic and Jurij Koruza and J{\"{u}}rgen R{\"{o}}del},
  title   = {{Control of polarization in bulk ferroelectrics by mechanical dislocation imprint}},
  journal = {Science},
  month   = may,
  year    = 2021,
  volume  = 372,
  number  = 6545,
  pages   = {961--964},
  note    = {\url{https://doi.org/10.1126/science.abe3810}}
}

% MOOSE
% "We demonstrate that a numerical solution using the MOOSE software precisely matches the analytical formulae."
@Article{Wilkins_2021,
  author  = {Andy Wilkins and Christopher P. Green and Jonathan Ennis-King},
  title   = {An open-source multiphysics simulation code for coupled problems in porous media},
  journal = {Computers \& Geosciences},
  month   = sep,
  year    = 2021,
  volume  = 154,
  pages   = {104820 (10 pages)},
  note    = {\url{https://doi.org/10.1016/j.cageo.2021.104820}}
}

% MOOSE
% "We use the mechanical simulator of ... MOOSE ... for all numerical simulations..."
% https://www.researchgate.net/publication/351619445_Predicting_the_yield_strength_of_a_3D_printed_porous_material_from_its_internal_geometry
@Article{Lesueur_2021,
  author  = {Martin Lesueur and Thomas Poulet and Manolis Veveakis},
  title   = {{Predicting the yield strength of a 3D printed porous material from its internal geometry}},
  journal = {Additive Manufacturing},
  month   = aug,
  year    = 2021,
  volume  = 44,
  pages   = {102061 (8 pages)},
  note    = {\url{https://doi.org/10.1016/j.addma.2021.102061}, EarthArXiv e-print: \url{https://doi.org/10.31223/osf.io/qfgz8}}
}

% MOOSE/BISON
@Article{Ozawa_2021,
  author  = {Takayuki Ozawa and Shun Hirooka and Masato Kato and Stephen Novascone and Pavel Medvedev},
  title   = {{Development of fuel performance analysis code, BISON for MOX, named Okami: Analyses of pore migration behavior to affect the MA-bearing MOX fuel restructuring}},
  journal = {Journal of Nuclear Materials},
  month   = sep,
  year    = 2021,
  volume  = 553,
  pages   = {153038 (16 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153038}}
}

% MOOSE/SAM
@TechReport{OGrady_2021,
  author      = {Daniel O'Grady and Travis Mui and Alvin Lee and Ling Zou and Guojun Hu and Rui Hu},
  title       = {{SAM code enhancement, validation, and reference model development for fluoride-salt-cooled high-temperature reactors}},
  institution = {Argonne National Laboratory},
  day         = 1,
  month       = apr,
  year        = 2021,
  number      = {ANL/NSE-21/15},
  note        = {\url{https://doi.org/10.2172/1781830}}
}

% MOOSE/BISON
% "... measure the cladding temperature during the transient, which are in reasonable
% agreement with predicted peak cladding temperatures using a simple BISON fuel performance model."
@Article{Kamerman_2021,
  author  = {David Kamerman and Nicolas Woolstenhulme and Devin Imholte and Austin Fleming and Colby Jensen and Charles Folsom and Connor Woolum and Korbin Tritthart and Jason Schulthess and Dan Wachs},
  title   = {Transient testing of uranium silicide fuel in zircaloy and silicon carbide cladding},
  journal = {Annals of Nuclear Energy},
  month   = sep,
  year    = 2021,
  volume  = 160,
  pages   = {108410 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2021.108410}}
}

% MOOSE
% SAM uses MOOSE
@TechReport{RHu_2021,
  author      = {Rui Hu and Ling Zou and Guojun Hu and Daniel Nunez and Travis Mui and Tingzhou Fei},
  title       = {{SAM Theory Manual}},
  institution = {Argonne National Laboratory},
  day         = 1,
  month       = feb,
  year        = 2021,
  number      = {ANL/NSE-17/4},
  note        = {\url{https://doi.org/10.2172/1781819}}
}

% MOOSE
% "These constitutive equations have been implemented as a material model and interfaced with ... (MOOSE)"
@Article{Ranjan_2021,
  author  = {Devraj Ranjan and Sankar Narayanan and Kai Kadau and Anirban Patra},
  title   = {{Crystal plasticity modeling of non-Schmid yield behavior: From Ni$_3$Al single crystals to Ni-base superalloys}},
  journal = {Modelling and Simulation in Materials Science and Engineering},
  month   = jul,
  year    = 2021,
  volume  = 29,
  number  = 5,
  pages   = {055005 (xx pages)},
  note    = {\url{https://doi.org/10.1088/1361-651X/abd621}, ArXiv e-print: \url{https://arxiv.org/abs/2010.08808}}
}

% MOOSE
% "We used the open-source finite element code MOOSE ... to solve the system of partial differential equations describing heat transport and fluid flow"
@Article{Sheldon_2021,
  author  = {Heather A. Sheldon and Peter M. Schaubs and Teagan N. Blaikie and Marcus Kunzmann and Thomas Poulet and Samuel C. Spinks},
  title   = {{3D thermal convection in the proterozoic McArthur River Zn-Pb-Ag mineral system, northern Australia}},
  journal = {Ore Geology Reviews},
  month   = jun,
  year    = 2021,
  volume  = 133,
  pages   = {104093 (21 pages)},
  note    = {\url{https://doi.org/10.1016/j.oregeorev.2021.104093}}
}

% MOOSE
% "The analysis is performed with ... (MOOSE), an open-source C++ math library and nonlinear finite-element solver ..."
@Article{Garg_2021,
  author  = {Mayank Garg and Jia En Aw and Xiang Zhang and Polette J. Centellas and Leon M. Dean and Evan M. Lloyd and Ian D. Robertson and Yiqiao Liu and Mostafa Yourdkhani and Jeffrey S. Moore and Philippe H. Geubelle and Nancy R. Sottos},
  title   = {Rapid synchronized fabrication of vascularized thermosets and composites},
  journal = {Nature Communications},
  month   = may,
  year    = 2021,
  volume  = 12,
  pages   = {2836 (9 pages)},
  note    = {\url{https://doi.org/10.1038/s41467-021-23054-7}}
}

% MOOSE/BISON
% "An electrical conductivity model has been developed and coupled with the existing thermomechanical modeling capability in the BISON nuclear fuel performance code."
@Article{Yeh_2021,
  author  = {Ju-Yuan Yeh and Benjamin W. Spencer and Sobhan Patnaik and Travis W. Knight and Mary Lou Dunzik-Gougar},
  title   = {Coupled physics simulation of fracture in nuclear fuel pellets induced by resistive heating},
  journal = {Journal of Nuclear Materials},
  month   = sep,
  year    = 2021,
  volume  = 553,
  pages   = {153004 (16 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.153004}}
}

% MOOSE/Sockeye
@TechReport{Hansel_2021b,
  author      = {Joshua E. Hansel and Lise Cecile Madeleine Charlot},
  title       = {{Increasing the usability of Sockeye: Implementing customer-driven modeling improvements, features, and documentation of Sockeye}},
  institution = {Idaho National Laboratory},
  day         = 1,
  month       = apr,
  year        = 2021,
  number      = {INL/EXT-21-61673},
  note        = {\url{https://doi.org/10.2172/1773703}}
}

% MOOSE
% "Self-consistent solutions to this equation are obtained by using the ... (MOOSE) finite-element platform..."
@phdthesis{Koushan_thesis,
  author = {Foroozan Koushan},
  school = {University of California Santa Cruz},
  title  = {{Computational study of switching mechanism and data retention in dielectric thin film memristor using phase-field methodology}},
  note   = {\url{https://escholarship.org/uc/item/9s55d599}},
  month  = mar,
  year   = 2021
}

% MOOSE
% "Nonlinear flow is realized via the [MOOSE] Navier-Stokes module..."
@Article{Egert_2021,
  author  = {Robert Egert and Fabian Nitschke and Maziar Gholami Korzani and Thomas Kohl},
  title   = {{Stochastic 3D Navier--Stokes flow in self-affine fracture geometries controlled by anisotropy and channeling}},
  journal = {Geophysical Research Letters},
  month   = may,
  year    = 2021,
  volume  = 48,
  number  = 9,
  pages   = {e2020GL092138 (10 pages)},
  note    = {\url{https://doi.org/10.1029/2020GL092138}}
}

% libMesh/IBAMR
% "The IB/FE formulation used in this study is implemented in the open
% source IBAMR software ... leveraging several opensource computational
% libraries, including ... libMesh"
% https://www.maths.gla.ac.uk/~xl/pfsi-heart.pdf
@Article{Richardson_2021,
  author  = {S. I. Heath Richardson and H. Gao and J. Cox and R. Janiczek and B. E. Griffith and C. Berry and X. Y. Luo},
  title   = {A poroelastic immersed finite element framework for modelling cardiac perfusion and fluid-structure interaction},
  journal = {International Journal for Numerical Methods in Biomedical Engineering},
  month   = may,
  year    = 2021,
  volume  = 37,
  number  = 5,
  pages   = {e3446 (22 pages)},
  note    = {\url{https://doi.org/10.1002/cnm.3446}}
}

% MOOSE
% "The tsunami generation and propagation was conducted using SWIM, an in-house partial
% differential equation solver built on MOOSE framework"
@Article{Elbanna_2021,
  author  = {Ahmed Elbanna and Mohamed Abdelmeguid and Xiao Ma and Faisal Amlani and Harsha S. Bhat and Costas Synolakis and Ares J. Rosakis},
  title   = {Anatomy of strike slip fault tsunami-genesis},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  month   = may,
  year    = 2021,
  volume  = 118,
  number  = 19,
  pages   = {e2025632118 (11 pages)},
  note    = {\url{https://doi.org/10.1073/pnas.2025632118}, EarthArXiv e-print: \url{https://doi.org/10.31223/X57G72}}
}

% MOOSE
% "We implemented the system of equations ... relying on the MOOSE environment"
% ResearchGate Preprint:
% https://www.researchgate.net/publication/346143560_Strain_localization_regularization_and_patterns_formation_in_rate-dependent_plastic_materials_with_multiphysics_coupling/references
@Article{Jacquey_2021,
  author  = {Antoine Jacquey and Hadrien Rattez and Manolis Veveakis},
  title   = {Strain localization regularization and patterns formation in rate-dependent plastic materials with multiphysics coupling},
  journal = {Journal of the Mechanics and Physics of Solids},
  month   = jul,
  year    = 2021,
  volume  = 152,
  pages   = {104422 (15 pages)},
  note    = {\url{https://doi.org/10.1016/j.jmps.2021.104422}, ArXiv e-print: \url{https://arxiv.org/abs/2011.10717}}
}

% MOOSE
% "The numerical analysis was conducted using ... (MOOSE)"
@Article{Lloyd_2021,
  author  = {Evan M. Lloyd and Elizabeth C. Feinberg and Yuan Gao and Suzanne R. Peterson and Bhaskar Soman and Julie Hemmer and Leon M. Dean and Qiong Wu and Philippe H. Geubelle and Nancy R. Sottos and Jeffrey S. Moore},
  title   = {Spontaneous patterning during frontal polymerization},
  journal = {ACS Central Science},
  month   = apr,
  year    = 2021,
  volume  = 7,
  number  = 4,
  pages   = {603--612},
  note    = {\url{https://doi.org/10.1021/acscentsci.1c00110}}
}

% libMesh
% "The multiphysics model, written in the C++ language environment, is built on two
% open and numerical libraries: ... (PETSc), and libMesh."
@Article{SeungjinSeo_2021,
  author  = {Seungjin Seo and Byunggi Park and Sung Joong Kim and Ho Cheol Shin and Seo Jeong Lee and Minho Lee and Sungyeol Choi},
  title   = {{BOTANI: High-fidelity multiphysics model for boron chemistry in CRUD deposits}},
  journal = {Nuclear Engineering and Technology},
  month   = may,
  year    = 2021,
  volume  = 53,
  number  = 5,
  pages   = {1676--1685},
  note    = {\url{https://doi.org/10.1016/j.net.2020.11.008}}
}

% MOOSE
% I was not able to view this report but presumably some of the accomplishments involved running MOOSE.
% https://www.osti.gov/biblio/1773707-nuclear-science-user-facilities-hpc-fy2020-operations-accomplishments-report
@TechReport{Parker_2021,
  author      = {Stephanie J. Parker},
  title       = {{Nuclear Science User Facilities HPC: FY2020 operations and accomplishments report}},
  institution = {Idaho National Laboratory},
  day         = mar,
  month       = 30,
  year        = 2021,
  number      = {INL/EXT-21-61863},
  note        = {\url{https://tinyurl.com/tzp5d4ex}}
}

% MOOSE/SAM
@TechReport{Zou_2021b,
  author      = {Ling Zou and Dan O'Grady and Guojun Hu and Rui Hu},
  title       = {{Explicit modeling of pebble temperature in the porous-medium framework for pebble-bed reactors applications}},
  institution = {Argonne National Laboratory},
  day         = 1,
  month       = mar,
  year        = 2021,
  number      = {ANL-NSE-21/9},
  note        = {\url{https://doi.org/10.2172/1773605}}
}

% MOOSE
% "The coupled 2MPFC-CH system was implemented within the MOOSE framework..."
@Article{Chockalingam_2021,
  author  = {Karthikeyan Chockalingam and Willy D{\"{o}}rfler},
  title   = {{Implementation of the coupled two-mode phase field crystal model with Cahn--Hilliard for phase-separation in battery electrode particles}},
  journal = {International Journal for Numerical Methods in Engineering},
  month   = may,
  year    = 2021,
  volume  = 122,
  number  = 10,
  pages   = {2566--2580},
  note    = {\url{https://doi.org/10.1002/nme.6632}}
}

% MOOSE
% "All microscopic simulations were conducted with the FE framework MOOSE"
@Article{Guo_2021,
  author  = {Theron Guo and Ond{\v{r}}ej Roko{\v{s}} and Karen Veroy},
  title   = {{Learning constitutive models from microstructural simulations via a non-intrusive reduced basis method}},
  journal = {Computer Methods in Applied Mechanics and Engineering},
  month   = oct,
  year    = 2021,
  volume  = 384,
  pages   = {113924 (23 pages)},
  note    = {\url{https://doi.org/10.1016/j.cma.2021.113924}, ArXiv e-print: \url{https://arxiv.org/abs/2104.04451}}
}

% MOOSE/phase_field
% "The scope of this research covers an alternative porosimetry test and different numerical
% simulations of existing laboratory experiments and benchmark problems using ... in-house
% programming in MOOSE framework."
@phdthesis{Jarrahi_thesis,
  author = {Miad Jarrahi},
  school = {University of Manitoba},
  title  = {{Hydraulic fracturing: Rock characterization and elastic-plastic fracture propagation}},
  note   = {\url{https://mspace.lib.umanitoba.ca/handle/1993/35391}},
  month  = mar,
  year   = 2021
}

% libMesh
% Note: I do not have access to this article, but presumably it is related to Luo_2021 by the
% same authors.
@InProceedings{Luo_2021b,
  author    = {L. Luo and X. Cai and D. Keyes},
  title     = {{Nonlinear preconditioning for two-phase flows}},
  booktitle = {{Proceedings of the Fifth EAGE Workshop on High Performance Computing for Upstream}},
  address   = {Online},
  pages     = {1--5},
  month     = sep,
  year      = 2021,
  note      = {\url{https://doi.org/10.3997/2214-4609.2021612015}}
}

% libmesh
% "The algorithms are implemented using libMesh for the finite element assembly ..."
% ResearchGate Preprint:
% https://www.researchgate.net/publication/350194736_Nonlinear_preconditioning_strategies_for_two-phase_flows_in_porous_media_discretized_by_a_fully_implicit_discontinuous_Galerkin_method/references
@Article{Luo_2021,
  author  = {Li Luo and Xiao-Chuan Cai and David Keyes},
  title   = {{Nonlinear preconditioning strategies for two-phase flows in porous media discretized by a fully implicit discontinuous Galerkin method}},
  journal = {Journal of Computational Physics},
  month   = may,
  year    = 2021,
  volume  = 409,
  pages   = {109312 (19 pages)},
  note    = {\url{https://doi.org/10.1016/j.jcp.2020.109312}, SIAM Journal on Scientific Computing Special Issue: Copper Mountain 2020, \url{https://doi.org/10.1137/20M1344652}}
}

% MOOSE/phase_field
@Article{Schwen_2021b,
  author  = {D. Schwen and C. Jiang and L. K. Aagesen},
  title   = {{A sublattice phase-field model for direct CALPHAD database coupling}},
  journal = {Computational Materials Science},
  month   = jul,
  year    = 2021,
  volume  = 195,
  pages   = {110466 (6 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110466}, ArXiv e-print: \url{https://arxiv.org/abs/2103.16603}}
}

% libMesh
% "The proposed simulator ... relies on ... libraries for mesh generation (CGAL), finite element (libMesh) and underlying algebra (PETSc)"
@Article{Poli_2021,
  author  = {Renato Poli and Rafael Gioria and Ronaldo Carrion},
  title   = {A poroelastic simulator with hydraulic fracture propagation using cohesive finite elements},
  journal = {Journal of the Brazilian Society of Mechanical Sciences and Engineering},
  month   = mar,
  year    = 2021,
  volume  = 43,
  pages   = {175 (13 pages)},
  note    = {\url{https://doi.org/10.1007/s40430-020-02787-4}}
}

% MOOSE/BISON
@Article{Seo_2021,
  author  = {Seok Bin Seo and Edward Matthew Duchnowski and Miles O'Neal and Arthur T. Motta and Florian Passelaigue and Soyoung Kang and Giovanni Pastore and Annalisa Manera and Victor Petrov and Pei-Hsun Huang and Nicholas R. Brown},
  title   = {{Sensitivity analysis of BISON model for characterization of impact of experimental parameters on hydrogen migration and redistribution in zirconium-based alloys}},
  journal = {Journal of Nuclear Materials},
  month   = jul,
  year    = 2021,
  volume  = 550,
  pages   = {152941 (27 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.152941}}
}

% libMesh
% "We implement the whole model in libMesh"
@Article{Grave_2021b,
  author  = {Mal{\'{u}} Grave and Alvaro L. G. A. Coutinho},
  title   = {Adaptive mesh refinement and coarsening for diffusion-reaction epidemiological models},
  journal = {Computational Mechanics},
  month   = apr,
  year    = 2021,
  volume  = 67,
  pages   = {1177--1199},
  note    = {\url{https://doi.org/10.1007/s00466-021-01986-7}, ArXiv e-print: \url{https://arxiv.org/abs/2010.11861}}
}

% MOOSE
% "A Kim-Kim-Suzuki (KKS) phase-field model for eutectic solidification is implemented
% for this multi-component alloy system using a MOOSE finite element framework."
@Article{Sagar_2021,
  author  = {Boina Sagar and Krishanu Biswas and Rajdip Mukherjee},
  title   = {A phase-field study on a eutectic high-entropy alloy during solidification},
  journal = {Philosophical Magazine Letters},
  month   = jan,
  year    = 2021,
  volume  = 101,
  number  = 4,
  pages   = {160--172},
  note    = {\url{https://doi.org/10.1080/09500839.2021.1877366}}
}

% MOOSE
% "... we use the open-source parallel computational framework MOOSE
% ... and libMesh ... to implement the model we mentioned above."
@phdthesis{Bai_thesis,
  author = {Yang Bai},
  school = {Technische Universit{\"{a}}t Darmstadt},
  title  = {Chemo-mechanical modeling of lithium-ion batteries},
  note   = {\url{https://doi.org/10.26083/tuprints-00017542}},
  month  = mar,
  year   = 2021
}

% MOOSE/SAM
@Article{Zou_2021,
  author  = {Ling Zou and Guojun Hu and Dan O'Grady and Rui Hu},
  title   = {{Code validation of SAM using natural-circulation experimental data from the compact integral effects test (CIET) facility}},
  journal = {Nuclear Engineering and Design},
  month   = jun,
  year    = 2021,
  volume  = 377,
  pages   = {111144 (10 pages)},
  note    = {\url{https://doi.org/10.1016/j.nucengdes.2021.111144}}
}

% MOOSE/phase_field
@Article{SZhang_2021,
  author  = {Shuaifang Zhang and Dong-Uk Kim and Wen Jiang and Michael R. Tonks},
  title   = {A phase field model of crack propagation in anisotropic brittle materials with preferred fracture planes},
  journal = {Computational Materials Science},
  month   = jun,
  year    = 2021,
  volume  = 193,
  pages   = {110400 (11 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110400}}
}

% libMesh
% "Our framework utilizes LibMesh for finite element assembly and UTOPIA 29 for non-linear solvers"
% Supplement Paper from the 10th TRM Forum on Computer Simulation and Experimental Assessment of
% Cardiac Function: Towards the Digital Twin, Lugano (CH), 8-10 December, 2019
@Article{Chegini_2021,
  author  = {Fatemeh Chegini and Alena Kopani{\v{c}}{\'{a}}kov{\'{a}} and Rolf Krause and Martin Weiser},
  title   = {Efficient identification of scars using heterogeneous model hierarchies},
  journal = {EP Europace},
  month   = mar,
  year    = 2021,
  volume  = 23,
  number  = {Supplement\_1},
  pages   = {i113--i122},
  note    = {\url{https://doi.org/10.1093/europace/euaa402}}
}

% libMesh
% "The continuum reaction-diffusion model is solved using the C++ finite-element library libMesh"
@Article{Lima_2021,
  author  = {Ernesto A. B. F. Lima and Danial Faghihi and Russel Philley and Jianchen Yang and John Virostko and Caleb M. Phillips and Thomas Yankeelov},
  title   = {{Bayesian calibration of a stochastic, multiscale agent-based model for predicting \emph{in vitro} tumor growth}},
  journal = {PLoS Computational Biology},
  month   = nov,
  year    = 2021,
  volume  = 17,
  number  = 11,
  pages   = {e1008845 (35 pages)},
  note    = {\url{https://doi.org/10.1371/journal.pcbi.1008845}, bioR$\chi$iv e-print: \url{https://doi.org/10.1101/2021.03.03.433731}}
}

% MOOSE
% "We use the finite element solver - MOOSE Framework to simulate the physics of naturally convected porous media."
@Article{Huang_2021,
  author  = {Po-Wei Huang and Florian Wellmann},
  title   = {{An explanation to the Nusselt--Rayleigh discrepancy in naturally convected porous media}},
  journal = {Transport in Porous Media},
  month   = mar,
  year    = 2021,
  volume  = 137,
  pages   = {195--214},
  note    = {\url{https://doi.org/10.1007/s11242-021-01556-8}, EarthArXiv e-print: \url{https://doi.org/10.31223/X5KK5F}}
}

% libMesh
% "The problem ... is ... implemented in the open-source parallel C++ finite element library libMesh"
@Article{Mortensen_2021,
  author  = {Peter Mortensen and Hao Gao and Godfrey Smith and Radostin D. Simitev},
  title   = {Action potential propagation and block in a model of atrial tissue with myocyte-fibroblast coupling},
  journal = {Mathematical Medicine and Biology: A Journal of the IMA},
  month   = mar,
  year    = 2021,
  volume  = 38,
  number  = 1,
  pages   = {106--131},
  note    = {\url{https://doi.org/10.1093/imammb/dqaa014}, ArXiv e-print: \url{https://arxiv.org/abs/2012.05368}}
}

% MOOSE
% "... we chose to use ... REDBACK ... to implement all features presented in this study, based on ... (MOOSE)"
@Article{Poulet_2021,
  author  = {Thomas Poulet and Martin Lesueur and Ulrich Kelka},
  title   = {{Dynamic modelling of overprinted low-permeability fault cores and surrounding damage zones as lower dimensional interfaces for multiphysics simulations}},
  journal = {Computers \& Geosciences},
  month   = may,
  year    = 2021,
  volume  = 150,
  pages   = {104719 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.cageo.2021.104719}}
}

% The coupled transport process ... is implemented in ... (MOOSE)"
@Article{Jain_2021,
  author  = {Amit Jain and Bora Gencturk},
  title   = {Multiphysics and multiscale modeling of coupled transport of chloride ions in concrete},
  journal = {Materials},
  month   = feb,
  year    = 2021,
  volume  = 14,
  number  = 4,
  pages   = {885 (29 pages)},
  note    = {\url{https://doi.org/10.3390/ma14040885}}
}

% MOOSE
@Article{ZLiu_2021,
  author  = {Zhouyu Liu and Xiaobei Xu and Hongchun Wu and Liangzhi Cao},
  title   = {{Multidimensional multiphysics simulations of the supercritical water-cooled fuel rod behaviors based on a new fuel performance code developed on the MOOSE platform}},
  journal = {Nuclear Engineering and Design},
  month   = apr,
  year    = 2021,
  volume  = 375,
  pages   = {111085 (18 pages)},
  note    = {\url{https://doi.org/10.1016/j.nucengdes.2021.111085}}
}

% MOOSE/Magpie
@Article{Schwen_2021,
  author  = {Daniel Schwen and Sebastian Schunert and Andrea Jokisaari},
  title   = {{Evolution of microstructures in radiation fields using a coupled binary-collision Monte Carlo phase field approach}},
  journal = {Computational Materials Science},
  month   = may,
  year    = 2021,
  volume  = 192,
  pages   = {110321 (10 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2021.110321}}
}

% MOOSE/BISON
@Article{Jiang_2021,
  author  = {Wen Jiang and Jason D. Hales and Benjamin W. Spencer and Blaise P. Collin and Andrew E. Slaughter and Stephen R. Novascone and Aysenur Toptan and Kyle A. Gamble and Russell Gardner},
  title   = {{TRISO particle fuel performance and failure analysis with BISON}},
  journal = {Journal of Nuclear Materials},
  month   = may,
  year    = 2021,
  volume  = 548,
  pages   = {152795 (18 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.152795}}
}

% MOOSE
% "A finite element code, called MOSKITO ... has been developed by the second author using MOOSE framework"
% https://pangea.stanford.edu/ERE/db/GeoConf/papers/SGW/2021/Esmaeilpour.pdf
@InProceedings{Esmaeilpour_2021,
  author    = {Morteza Esmaeilpour and Maziar Gholami Korzani and Thomas Kohl},
  title     = {{Performance analyses of deep closed-loop U-shaped heat exchanger system with a long horizontal extension}},
  booktitle = {{Proceedings of the 46th Workshop on Geothermal Reservoir Engineering}},
  address   = {Stanford, California},
  pages     = {SGP-TR-218 (8 pages)},
  month     = feb # {~15--17,},
  year      = 2021,
  note      = {\url{https://tinyurl.com/1fe2s6yv}}
}

% MOOSE
@phdthesis{Kopanicakova_thesis,
  author = {Alena Kopani{\v{c}}{\'{a}}kov{\'{a}}},
  school = {Universit{\`{a}} della Svizzera Italiana},
  title  = {Multilevel minimization in trust-region framework},
  note   = {\url{https://doc.rero.ch/record/330121}},
  month  = jan,
  year   = 2021
}

% libMesh
% "FEB3 (pronounced Phoebe) is founded on several high-performance,
% open-source numerical libraries: PETSc, libMesh, GSL, and blitz++."
@Article{deMontigny_2021,
  author  = {Jean de Montigny and Alexandros Iosif and Lukas Breitwieser and Marco Manca and Roman Bauer and Vasileios Vavourakis},
  title   = {{An \emph{in silico} hybrid continuum-/agent-based procedure to modelling cancer development: interrogating the interplay amongst glioma invasion, vascularity and necrosis}},
  journal = {Methods},
  month   = jan,
  year    = 2021,
  volume  = 185,
  pages   = {94--104},
  note    = {\url{https://doi.org/10.1016/j.ymeth.2020.01.006}}
}

% MOOSE/BISON
@Article{Verdolin_2021,
  author  = {Filippo Verdolin and Stephen Novascone and Davide Pizzocri and Giovanni Pastore and Tommaso Barani and Lelio Luzzi},
  title   = {{Modelling fission gas behaviour in fast reactor (U,Pu)O$_2$ fuel with BISON}},
  journal = {Journal of Nuclear Materials},
  month   = apr,
  year    = 2021,
  volume  = 547,
  pages   = {152728 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2020.152728}}
}

% MOOSE
@Article{Beeler_2021,
  author  = {Benjamin Beeler and Michael W. D. Cooper and Zhi-Gang Mei and Daniel Schwen and Yongfeng Zhang},
  title   = {{Radiation driven diffusion in $\gamma$U-Mo}},
  journal = {Journal of Nuclear Materials},
  month   = jan,
  year    = 2021,
  volume  = 543,
  pages   = {152568 (20 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2020.152568}}
}

% libMesh
% "The mesh is loaded and processed by a 3rd party mesh processing package..."
@InProceedings{Blahos_2021,
  author    = {J. Blaho{\v{s}} and A. Vizzaccaro and L. Salles and F. El Haddad},
  title     = {Parallel harmonic balance method for analysis of nonlinear dynamical systems},
  booktitle = {{Proceedings of the ASME Turbo Expo 2020: Turbomachinery Technical Conference and Exposition (GT2020)}},
  address   = {Virtual, Online},
  pages     = {GT2020-15392, V011T30A028; (12 pages)},
  month     = jan,
  year      = 2021,
  note      = {\url{https://doi.org/10.1115/GT2020-15392}}
}

% MOOSE/BISON
@Article{Hilty_2021,
  author  = {Floyd W. Hilty and Dong-Uk Kim and Michael R. Tonks},
  title   = {{Impact of fission gas bubbles on thermal conductivity of UO$_2$ fuels with high thermal conductivity additives}},
  journal = {Journal of Nuclear Materials},
  month   = apr,
  year    = 2021,
  volume  = 546,
  pages   = {152779 (9 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2021.152779}}
}

% MOOSE
% "This framework, developed in MOOSE, considers the effects of elevated temperature..."
@Article{Saklani_2021,
  author  = {Naman Saklani and Gaurav Banwat and Benjamin Spencer and Subramaniam Rajan and Gaurav Sant and Narayanan Neithalath},
  title   = {{Damage development in neutron-irradiated concrete in a test reactor: Hygro-thermal and mechanical simulations}},
  journal = {Cement and Concrete Research},
  month   = apr,
  year    = 2021,
  volume  = 142,
  pages   = {106349 (16 pages)},
  note    = {\url{https://doi.org/10.1016/j.cemconres.2020.106349}}
}

% MOOSE/BISON
@Article{Pastore_2021b,
  author  = {G. Pastore and K. A. Gamble and R. L. Williamson and S. R. Novascone and R. J. Gardner and J. D. Hales},
  title   = {{Analysis of fuel rod behavior during loss-of-coolant accidents using the BISON code: Fuel modeling developments and simulation of integral experiments}},
  journal = {Journal of Nuclear Materials},
  month   = mar,
  year    = 2021,
  volume  = 545,
  pages   = {152645 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2020.152645}}
}

% MOOSE/Pronghorn
@Article{Novak_2021,
  author  = {A. J. Novak and S. Schunert and R. W. Carlsen and P. Balestra and R. N. Slaybaugh and R. C. Martineau},
  title   = {Multiscale thermal-hydraulic modeling of the pebble bed fluoride-salt-cooled high-temperature reactor},
  journal = {Annals of Nuclear Energy},
  month   = may,
  year    = 2021,
  volume  = 154,
  pages   = {107968 (21 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2020.107968}}
}

% MOOSE
% "To solve the dynamic equations ... we use ... MOOSE"
% Also appeared as a poster in:
% American Physical Society March Meeting 2020, vol. 65, no. 1, Mar. 2-6, 2020, Denver, Colorado.
@Article{Laghmach_2021,
  author  = {Rabia Laghmach and Davit A. Potoyan},
  title   = {Liquid-liquid phase separation driven compartmentalization of reactive nucleoplasm},
  journal = {Physical Biology},
  month   = jan,
  year    = 2021,
  volume  = 18,
  number  = 1,
  pages   = {015001 (8 pages)},
  note    = {\url{https://doi.org/10.1088/1478-3975/abc5ad}, bioR$\chi$iv e-print: \url{https://doi.org/10.1101/2020.07.13.200980}}
}

% MOOSE/BISON
@Article{Hirschhorn_2021,
  author  = {Jacob Hirschhorn and Michael Tonks and Christopher Matthews},
  title   = {{A CALPHAD-informed approach to modeling constituent redistribution in Zr-based metallic fuels using BISON}},
  journal = {Journal of Nuclear Materials},
  month   = feb,
  year    = 2021,
  volume  = 544,
  pages   = {152657 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2020.152657}}
}

% MOOSE
% "The tiled SM was integrated within the MOOSE finite element framework."
% Special Issue: Augmenting Physics-based Models in ICME with Machine Learning and Uncertainty Quantification
@Article{Tallman_2021,
  author  = {Aaron E. Tallman and M. Arul Kumar and Christopher Matthews and Laurent Capolungo},
  title   = {{Surrogate modeling of viscoplasticity in steels: Application to thermal, irradiation creep and transient loading in HT-9 cladding}},
  journal = {Journal of the Minerals, Metals, and Materials Society (JOM)},
  month   = jan,
  year    = 2021,
  volume  = 73,
  number  = 1,
  pages   = {126--137},
  note    = {\url{https://doi.org/10.1007/s11837-020-04402-2}}
}

% BISON
% "... preliminary performance analysis ... is conducted using ... BISON"
@Article{He_2021,
  author  = {Yanan He and Koroush Shirvan and Yingwei Wu and Guanghui Su},
  title   = {Preliminary prediction for survival time of fuel rod under critical heat flux},
  journal = {Annals of Nuclear Energy},
  month   = feb,
  year    = 2021,
  volume  = 151,
  pages   = {107896 (14 pages)},
  note    = {\url{https://doi.org/10.1016/j.anucene.2020.107896}}
}

% MOOSE
% "... some significant works on neutronic and thermal-hydraulic codes coupling, and
% large research project, including ... (MOOSE) and (CASL), are reviewed."
@InCollection{Gui_2021,
  author    = {Miao Gui and Xingang Zhao},
  title     = {Multiphysics coupling plan},
  pages     = {75--94},
  year      = 2021,
  publisher = {Woodhead Publishing Series in Energy},
  booktitle = {{Nuclear Power Plant Design and Analysis Codes}},
  note      = {Chapter 4, \url{https://doi.org/10.1016/B978-0-12-818190-4.00004-8}}
}

% MOOSE/SAM
% Full title includes "Development, Validation, and Application"
@InCollection{Zhou_2021,
  author    = {Yukun Zhou and Alejandro Perez and Jun Wang},
  title     = {{Development and application of System Analysis Module from the user's view}},
  pages     = {313--332},
  year      = 2021,
  publisher = {Woodhead Publishing Series in Energy},
  booktitle = {{Nuclear Power Plant Design and Analysis Codes}},
  note      = {Chapter 13, \url{https://doi.org/10.1016/B978-0-12-818190-4.00013-9}}
}

% MOOSE
% "The resulting set of equations has been implemented in the finite element, multiphysics framework MOOSE ..."
@Article{TZhang_2021,
  author  = {Tao Zhang and Marc Kamlah},
  title   = {{Microstructure evolution and intermediate phase-induced varying solubility limits and stress reduction behavior in sodium ion batteries particles of Na$_x$FePO$_4$ $(0 < x < 1)$}},
  journal = {Journal of Power Sources},
  month   = jan,
  year    = 2021,
  volume  = 483,
  pages   = {229187 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.jpowsour.2020.229187}}
}

% BISON
% "We implement Eqs. 55-58 into the multi-physics computational framework MOOSE/BISON"
@Article{WeiLi_2021,
  author  = {Wei Li and Koroush Shirvan},
  title   = {Multiphysics phase-field modeling of quasi-static cracking in urania ceramic nuclear fuel},
  journal = {Ceramics International},
  month   = jan,
  year    = 2021,
  volume  = 47,
  number  = 1,
  pages   = {793--810},
  note    = {\url{https://doi.org/10.1016/j.ceramint.2020.08.191}}
}

% MOOSE/BISON
% "Our model has been implemented in BISON and considers the temperature history"
@Article{Tonks_2021,
  author  = {Michael R. Tonks and Pierre-Cl{\'{e}}ment A. Simon and Jacob Hirschhorn},
  title   = {{Mechanistic grain growth model for fresh and irradiated UO$_2$ nuclear fuel}},
  journal = {Journal of Nuclear Materials},
  month   = jan,
  year    = 2021,
  volume  = 543,
  pages   = {152576 (12 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2020.152576}}
}

% MOOSE/BISON
@Article{Pastore_2021,
  author  = {G. Pastore and R. L. Williamson and R. J. Gardner and S. R. Novascone and J. B. Tompkins and K. A. Gamble and J. D. Hales},
  title   = {{Analysis of fuel rod behavior during loss-of-coolant accidents using the BISON code: Cladding modeling developments and simulation of separate-effects experiments}},
  journal = {Journal of Nuclear Materials},
  month   = jan,
  year    = 2021,
  volume  = 543,
  pages   = {152537 (13 pages)},
  note    = {\url{https://doi.org/10.1016/j.jnucmat.2020.152537}}
}

% MOOSE
% "The FE simulations were performed using the open source software MOOSE"
@Article{Lin_2021,
  author  = {Binbin Lin and Yang Bai and Bai-Xiang Xu},
  title   = {Data-driven microstructure sensitivity study of fibrous paper materials},
  journal = {Materials \& Design},
  month   = jan,
  year    = 2021,
  volume  = 197,
  pages   = {109193 (23 pages)},
  note    = {\url{https://doi.org/10.1016/j.matdes.2020.109193}}
}

% MOOSE/phase_field
% "Time evolution of the system was performed according to the Cahn-Hilliard equation using the MOOSE finite element simulation framework"
@Article{Saffarini_2021,
  author  = {Mohammed H. Saffarini and George Z. Voyiadjis and Carlos J. Ruestes and Mohammadreza Yaghoobi},
  title   = {Ligament size dependency of strain hardening and ductility in nanoporous gold},
  journal = {Computational Materials Science},
  month   = jan,
  year    = 2021,
  volume  = 186,
  pages   = {109920 (20 pages)},
  note    = {\url{https://doi.org/10.1016/j.commatsci.2020.109920}}
}
